Cryptotermes secundus (drywood termite): 111862309
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Entry
111862309 CDS
T07421
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03013
Nucleocytoplasmic transport
csec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111862309
03015 mRNA surveillance pathway
111862309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csec03019
]
111862309
Messenger RNA biogenesis [BR:
csec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111862309
mRNA cycle factors
P-body specific factors
111862309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
ADPrib_exo_Tox
Motif
Other DBs
NCBI-GeneID:
111862309
NCBI-ProteinID:
XP_033606511
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MSGQFSVFLERRTRKGGALIVEVLREVVHNMDPTDLIPERRAKSWKREHEERCRRHQNNN
DLKKCRDPGYGPDQSVLLEMKDNSTELLKDAVRVEEMEMSASDKLLNGSGGVDVENEGTS
ALRMTIENSAIECESTNKESAESNVINNLGAVEGMLCDGRSSEIVSSLLHTAEGSDVETE
NNLCKQNLEKEGRDDFPATDGFCVNLMGDSKKPGHIYEGLSSCENMEENDRSYVIMQQFD
IEMPEITSEGYSRISGGTESGSSKLHKVKSGPLEVSAESSELTMMKGTELVHLEEALAKR
GDIMDISLEIPEWVPAREANVKPETLEDATPRYPDIMKDAAVERATQGQSGFKDVMHELL
GNISTAQEECVDTEESNQKADVLLDTGEELGKYGERGELAGLDTLEQAAMSGNRNFEIVD
SLVTSQDAEHSNNSSCDLENRSGAPNDHSKDSLKTDDHICSVHAEESTLSSFETPGNVAE
KLKEEETSGVKQGKNLFVELCHEENFARPVEIVDKTEHSVCVLASAKSVSPFRDGQQNDS
EFLEDSGTSGENNKFVTDSSFGNVAVEYKASDTDNGTMRDTSVSNLENSTAELNEGNPEH
LMDKPALEIVGDMFHEYVQLEGSSVNSKYCLGIDVVPDQTLPSETAFLQPSAMASEDKKI
LDLYVSEVEQRLNQKQILRQENQDVVNLRPDDSHFSKLDSSLKKNTAFVRKLKTFTCNQL
DSLLKDMSTLNLTKYVSEAAAAIVEAKLKMTDVIAAVELCNSLHHMYAEFSSHLLENWHR
FLTVKKDDRMINQSKLRVDLRFYAELINVGIFTHKEGLPLLGNVLTVLVNMDREEHNNVN
IILSFCRHCGEDYAGLVPRKIRLLAEQYQVSLPRSKLLTKEKQRNVKALLKEYYGSLVKH
VMKEHRDLQAFERQNKKILQTRGELSGERKEKWENLKYSYERLHTGMITFAEILDEDVPE
LPEDDYLKDEDLRLIGTSDGEETAFTSTIWEDEEEQRFYEYLTDMKEFLPSITVRPPEPV
SEISEDALDSEAEELEEESVVEGKDDEEEPSPPEPDDIEELECVANSSNKILMESFLTHL
PHCVNREMIDSSAVEFVMNLNTKYNRKKLVKMLFSVPRTRLDLLPFYARFVATLHPVVPD
VAVELGQFLKQDFKFHVRKKDQINIESKIKVVRFIGELVKFRMYSKIEALYCLKLLLHDF
THHHIEMCCSLLESCGRFLFRNVDSHQRTKVYLEQMMRKKSVTALDSRYVTMIENAFYYV
DPPDTAPFVRKERPPMHEFIRKILYQDLMKANTDKVLRLMRKLDWENPDLAEYAVKCLTM
AHNVKYYNIRCLASLLAGLVTHQETVGTHVVDGVMEDIRLGMEVNLPKYSQRRVAMIKYL
GELYNYRMVESSDIFKILYSLISFGVSQNPSSPSFLDPPEHLFRIRLVCVLLETCGQYFN
NGISKSKLDYFFTYFQRYFWLKYEDKYWTPENPFPVGIHYLFKDTLTSLRPKLCLFSSLE
EANQAVHQMQLEFAPMLSDRMPGLFGGGGGDDTDNILPTLGSDLGTIVEAASEGDDDACT
ESEVADATDAETETEESLSHDGRPMKKSAKCGGGEDGEGGEEEEEDQEFCEALSEFEDGE
GEGEWGGTSSSPLQRSQGDEASMVAALPQGPTHVECPEDEDFLSAFDRMVSDNIQDRMRE
TVKPQQVDISVPLHIKSSAKKTYEQLQETRIEEKCTMNFVLMIRKGHKQQYKSLAVPINS
ELALNLKNREEAERAEKERVKRLTLDINERLEEEDYQEMLAQAQRPVVMNLNRERKHKYQ
HPKGAPDADLIFGPKKVR
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atgagtggacagttctctgtttttctggagagaagaacaagaaaggggggggcactaatt
gtagaagttttaagagaagtagtgcataatatggatcccacagatcttataccagagcga
agagcaaagagttggaaacgtgagcacgaagagcggtgtcgtaggcatcaaaataataat
gatctaaagaaatgtcgtgatcctggatatggaccagatcagtctgtacttttagaaatg
aaggacaattcaacagaacttttgaaagatgcagttagagtggaggagatggaaatgtct
gcaagtgacaaacttttgaatggcagtggtggtgttgatgttgaaaatgaaggtacttct
gccttgaggatgaccattgagaactctgccattgaatgtgaaagcactaacaaagaatct
gcagaaagtaatgtaattaataatttgggagctgttgagggaatgttgtgcgatggcagg
agtagtgaaatagtctcttccttattacacactgcagaaggttcagatgttgaaactgaa
aataatttgtgtaagcagaatcttgaaaaggagggaagagatgattttcctgccacagat
ggtttttgtgtgaatttaatgggggattccaagaaacctggacatatttatgagggtttg
tcctcatgtgaaaatatggaagaaaatgacagatcatacgtgataatgcagcagtttgac
attgaaatgccagaaatcacatctgaagggtactctagaatttcaggaggaactgaatcg
ggatcttcaaaattacataaagttaagtcaggtcctctggaagtttcagcagagtcatca
gagctcacaatgatgaaaggaactgaactggtgcacttggaggaggcattggcaaagagg
ggagatatcatggatatatcacttgaaattccagaatgggttccagcaagagaagcaaat
gttaaaccagaaacattagaagatgccacaccaagatacccagatattatgaaagatgct
gcagtagaaagagcaacacaaggtcagtcaggatttaaagatgtaatgcatgaacttttg
ggaaacatcagtactgcccaagaagagtgtgtggacactgaggagtctaaccagaaagct
gatgttttgcttgacacaggagaagagttggggaagtatggagagagaggtgaattagcg
ggtttggatacgttggaacaagcagcaatgtcaggtaatagaaattttgaaattgtagat
tctttggttacttcccaagatgcagagcatagtaataattctagttgtgacttggagaac
agaagtggggcaccaaatgatcactcgaaagacagcttaaaaactgatgaccatatatgt
agtgttcatgccgaagagtccaccctcagcagttttgagactccaggaaatgttgcagaa
aaattaaaggaagaagaaacttctggtgtcaagcaaggaaagaatttgtttgtagaatta
tgccatgaagaaaattttgcaagacctgtagaaattgttgacaagaccgaacattctgtg
tgtgtgctcgctagtgccaaatcagtgtcaccttttcgagatggacaacaaaatgattct
gaattcttggaagactctggtacatctggtgagaataacaaatttgtaactgacagttcc
tttggaaatgtggctgtggagtataaagccagtgatacggacaatggaacaatgagagac
acaagtgtaagtaatttagaaaattcaacagcagaattgaatgaaggaaaccctgagcat
ttaatggataagccagctttagaaattgtaggtgacatgtttcatgaatacgtgcagttg
gaaggatcatctgtaaacagcaaatattgtcttggaattgacgttgttccagatcaaact
ttgccatcagaaactgcatttcttcagccatctgcaatggcaagtgaagataagaaaatt
ctagacttgtatgtatctgaagtagaacagagacttaatcagaagcaaattcttcgtcag
gagaatcaggatgtagtcaatctacgcccagatgactctcacttctccaaattggattca
agccttaagaagaatacagcatttgtgaggaaacttaaaacatttacatgcaatcaactt
gactccttgctgaaggatatgtcaacactcaacttaacaaagtatgtaagtgaagctgca
gcagccatagtggaggccaaactgaagatgacagatgttattgctgctgtggagctgtgt
aattccctgcatcatatgtatgcagaattctcttcacatcttttggagaactggcatagg
ttcttaacagttaagaaagatgaccgtatgataaatcagagtaaactgagagtcgattta
cgattttatgctgaattgataaatgtagggatattcacacacaaggagggattgcctctc
ctaggaaatgtactcacagtgctggtgaacatggacagggaagagcacaacaatgtcaat
atcattctgagtttctgtagacactgtggtgaagattatgcaggattggttccaagaaaa
attagattgctggcagagcagtatcaggtatcacttcccagaagcaagctgcttacaaag
gaaaagcagcgcaatgttaaagctttgctgaaggaatattatggatcattagtaaaacat
gttatgaaggaacacagagatcttcaggcatttgaaaggcagaacaagaagatattacag
acaagaggagaactgagtggagagaggaaagaaaaatgggaaaacctgaagtactcatat
gagcgactgcatactggaatgatcacatttgctgaaatactagatgaggatgtgcctgag
ctcccagaggatgattatttgaaggatgaagatttaagactgattggtaccagtgatggt
gaagagactgccttcacatcaacaatctgggaggatgaagaagaacagcgattctatgag
tacctgacagatatgaaggaattcctaccaagtatcactgtgcgaccacctgaaccagtt
tcagagatttctgaagatgctttggattcagaagcagaagaattggaggaagaatctgtt
gttgagggaaaggatgatgaagaggagccaagtcctccagaacctgatgacatagaagaa
ttagaatgtgtggcgaattccagtaacaagatattgatggagtcatttctgactcacctg
ccacactgtgtaaatcgtgaaatgattgacagttcagcggtagaatttgtcatgaacctg
aacaccaagtataacaggaagaaacttgtgaaaatgttgtttagtgtgcctcgtactcgt
ctggaccttcttccattttatgcaagatttgttgccacattgcatcctgtagtacctgat
gtcgctgtggagcttggccagttcctcaaacaagacttcaaattccatgtccgaaagaag
gatcagattaatattgaatccaagataaaagtcgtgagatttattggagagttggtgaag
ttcagaatgtactcaaagatagaggctttatattgcctgaaactgctgctccatgacttc
acacatcatcacattgaaatgtgctgcagccttctggaatcctgtggtcggttcttgttc
agaaatgtagactcacatcaacgaactaaagtgtatttggaacaaatgatgaggaagaag
agcgttacagcattagattctcgctatgtgacgatgattgaaaatgcattttattatgtg
gacccaccagacacagcaccatttgtgaggaaagaacgacctccaatgcatgaatttatt
cgtaagatattgtaccaagatttaatgaaggccaatacggataaagtgttgaggctgatg
cggaagttggactgggagaatccagatctagcagaatatgcggtgaaatgcctcactatg
gctcataatgttaaatattacaatatccgctgcttggccagtcttttggcaggtctggta
actcatcaggaaacagttgggacacatgtagttgatggggtgatggaggatatcaggttg
ggtatggaagtgaacctgcctaaatacagccagcgccgtgtggcaatgatcaagtatttg
ggtgaactctataattatcgcatggtggagagcagtgatatattcaagattctgtattca
ttgatctcgtttggtgtgtcacaaaacccttcaagtccctcatttttggatcctcctgaa
cacctattccgcatccgactagtgtgcgttcttttggagacatgtggtcagtatttcaac
aatggaataagcaagtcaaagctggattatttcttcacttacttccagaggtatttctgg
cttaaatatgaagataaatattggactccagaaaatccattcccagttggaatccattac
ttattcaaagatactttgacaagtttgcggccgaagctatgcttgttttcaagtttagag
gaagcaaatcaagcagttcatcaaatgcagttggaatttgcaccgatgctatcagatcgt
atgccagggctgtttggtggagggggtggagatgatacagacaacatactccctactctg
gggtctgatctcgggaccatcgtggaggcagcaagtgagggagatgatgatgcatgtact
gagtcagaagttgcggatgccacagatgcagaaacggagacagaggaatctctgtcgcac
gatggtcggcctatgaagaaatctgcaaaatgtggtggaggggaggatggtgaaggtgga
gaggaagaagaagaagatcaggaattctgtgaagctctttctgagtttgaagatggcgag
ggagagggagagtggggtggcacaagctcttcaccactacagaggagccagggagatgaa
gcatctatggtagcagccttaccacaagggcctactcatgttgaatgcccagaagatgaa
gacttcctctctgcatttgataggatggtatcagataacattcaagaccgcatgcgggag
acagtgaagccacaacaagttgacatatctgttccattgcacatcaaaagcagtgctaag
aagacctacgaacaattgcaagaaacaaggatagaagagaaatgtacaatgaactttgtg
ttgatgataaggaaaggtcacaaacaacagtacaagagtttggctgtacctattaattct
gagttggctctcaatttaaaaaatcgtgaagaagctgaacgagctgaaaaggagcgagtg
aaacgcctcacattggatatcaatgaaagactggaagaagaagattatcaagaaatgctt
gctcaggctcaaaggccagtggtcatgaatctgaacagggagaggaaacacaagtatcag
catccaaaaggtgcccccgatgcagacctcatatttggaccaaagaaagttaggtga
DBGET
integrated database retrieval system
