Cryptotermes secundus (drywood termite): 111863382
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Entry
111863382 CDS
T07421
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111863382
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csec03019
]
111863382
Enzymes [BR:
csec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111863382
Messenger RNA biogenesis [BR:
csec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
111863382
mRNA degradation factors
3'-5' decay
Ski complex
111863382
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
ResIII
DEXQc_Suv3
Helicase_C
MTR4-like_stalk
ASCC3_N
Motif
Other DBs
NCBI-GeneID:
111863382
NCBI-ProteinID:
XP_033606929
LinkDB
All DBs
Position
Unknown
AA seq
1259 aa
AA seq
DB search
MPKENSLDYEIQLPFGPPPVLPDVEKQLKEYLLCPDHLPIHDYKQAQKYWPREPNPKSLY
HFDVAPLGTTLKVDRDPTTGKLLRFREVAVDDIGHTAKNSMSLLRAPGLASEAVRGSSTN
YPFWPGGFTELLLQDENENENGDAEIDFVNITVPPGFERGIKLKADGKTPLEEKKEQEPL
SSDAESSAPEVILEEKVDSAVINLMSLIKQEEDLLGLWQEETKEDETKQTGKISLQNLEV
DIDADVAEVVPKEDIIPVLKITESAPLKRQTQLQWAEELDISCPVTDFEKKVPTMAKTWS
FELDTFQKKAILKLEEHANVLVAAHTSAGKTVVAEYAIALSKRHMTRSIYTSPIKALSNQ
KYRDFRETFGDVGLITGDFQVNQTAQCLIMTTEILRSMLYCGSEVIRDLEYVVFDEVHYL
NDSERGHVWEEVLILLPDHVSIVMLSATIPNTLDFANWVGATKKKKVYVVSTLKRPVPLQ
HYLYTGSKTGLFLIVEEAGKFIESGYDLAHTVKQTQKKQKAKYGSKEGKAHLTPKQEATI
WTVFVAQLRKEDKLPAVAFTLSRHRCDQNARNLTTVDLTTGSEKSFIHRFFNKSIQNLKE
PDRALPQVVALQDLLMRGIGVHHSGILPILKEIVEMLFQEGLVKLLFATETFAMGVNMPA
RTVLFDSIKKFDGCDVRTLLPAEYIQMAGRAGRRGLDKTGTVIIMCKVDVPGMKELENMM
LGKPMSLESKFRLTYSMILNLFRVEMISVEGMMSHSFKEFRHLSQQKKYEKELETVKEKM
KEISSNTQQQGLHWKSLSDFYDMAAEYLQLWSEFRKEFLAEPKYVKELTPGRMLLISHKE
HINKLGILLSLETIKKDRAFRVLVLCNDEKTRTVDYGDEIQLSVASSDKEKSEEQYKPDP
LWYKMLGLANKKKIFVPDEVGGHTILTVTTDDIIDIVKNKVSVDTNLVIQDWEKRQISRF
RDDPPGQTCSQAVQRLTEFTKNVSSGTVPLEFVGPAKDIHLKNFDVLQKLNDLEQKLNDC
TSMNIANFEQLFKEVFRCKQLEQKREDLLYKKSPRSLSLYPEFKERVCVLQELGYIDKNN
SVQLKGRVACEMGNHELMITEMVLHCVLADKQPAEIAALLSCLVFQQKRKTEPVLTETLK
KGVRQIEEIAKNVECMERKYGIESGHDKLNSGLVEVVYEWAQGKPFCEIMQLTDDVQEGI
IVRCIQQLNETLCDVKNAAHRIGDPALKQKMQEASDAIKRDIVFVASLYTSEDNPKPSL
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggaaaactcattggattatgaaattcagcttccctttgggccacctccagtg
ttgccagatgttgagaagcaattgaaggaatacttactgtgccctgaccatctcccaatt
catgattataaacaggctcaaaagtattggcccagagaaccaaatcccaagtctctttat
cactttgatgttgcacctttgggtaccacactaaaggtagatcgagatcccacaacaggg
aaacttctccggtttcgggaagtagctgtagatgatattggacacacagcaaagaactcc
atgtctttgctgcgagctcctggactggcaagtgaagcagtaagaggcagttctaccaac
tatccattctggccaggaggttttactgaactgttactacaggatgaaaatgaaaatgaa
aatggagatgctgaaatagattttgtaaatataacagtaccacctggttttgagagagga
attaaattaaaagcagatggaaagacaccacttgaagaaaagaaagaacaggaaccactc
agttcagatgctgaatcttcagcgccagaagtaatattggaagagaaagtggattcagca
gttataaatttaatgtccttaattaagcaggaagaggatttacttggactgtggcaggaa
gaaacaaaagaagatgaaacgaagcagacaggaaaaatttcgttacagaatctggaagtg
gatattgatgctgatgtagcagaagtagttcctaaggaagatattattcctgtcctaaag
atcacagagtcagctcccctgaagcgtcagacacaattacagtgggccgaagagttggat
atatcttgtcctgtcacagattttgaaaagaaagtacccactatggcaaagacatggtca
tttgaactagacacttttcagaaaaaggcgattttaaaactggaagagcatgctaatgta
cttgtagctgctcatacatctgctggtaaaactgtggttgcagaatatgccattgctctt
tcaaaaaggcacatgacaagatccatttatacatctccaattaaggcgctctcaaatcag
aaataccgtgacttcagagaaacttttggagatgtgggtctcataacaggggatttccag
gtcaaccagactgctcagtgtctgataatgactacagaaattctccgctccatgctttac
tgcggtagtgaagtgattcgtgatcttgagtatgttgtatttgatgaggttcactacctc
aatgattcagagaggggtcatgtatgggaagaggtgttaattctgctcccagatcatgta
agcattgtaatgcttagtgcaactatccccaacacactggactttgctaactgggtgggt
gcaacaaagaagaaaaaagtgtatgttgtcagtacattgaaacgacctgttccattacaa
cactacctgtacacaggttcgaagactggactatttctcatagttgaggaagcagggaaa
ttcatagaaagtggctatgatcttgcacatacagtaaaacagactcagaagaaacaaaaa
gcaaagtatggttctaaagaaggaaaggcacatttaactccaaaacaagaagcaacaatc
tggactgtatttgttgctcaactaaggaaagaagataagttgcctgcagtagccttcact
ttatcaagacatcgctgtgatcaaaacgcaagaaacttgaccactgttgatttgacaacg
ggaagtgagaagagtttcatacatagattctttaacaaaagcatacaaaacctgaaagaa
ccagacagagctctccctcaggttgtggcacttcaagacttgctaatgcgaggcatagga
gtacatcatagtgggatcctaccaattctcaaggaaatagtggagatgttatttcaggaa
ggattggttaagctcctctttgcaacggaaacatttgccatgggggtcaacatgcctgcc
cgcacagttctgtttgattccatcaagaaatttgatggatgtgatgtgagaacattactg
cctgctgagtacatccagatggctggacgagcaggcagaagaggacttgacaaaacagga
actgttatcatcatgtgcaaggttgatgttccaggaatgaaggagctcgagaatatgatg
cttggtaaaccaatgagtttggaatcaaaattccgacttacatactcaatgattttgaac
ctgtttcgagtggaaatgatatcggtggagggtatgatgtcacattcattcaaagagttt
agacacttaagccagcagaagaaatatgagaaggagctggaaaccgtaaaagaaaaaatg
aaggaaatttcttcaaacactcaacagcagggactccactggaagtcactctcagacttc
tatgacatggcagcagaatacctccagttatggtcagagtttagaaaagaatttttggca
gaacccaagtacgtgaaagaactgacaccaggtaggatgctgctgattagccacaaggaa
cacatcaataagcttgggatcctgctgagtttggaaacaatcaagaaagatagagccttc
agagtactggttctgtgtaatgatgagaaaactagaacagttgattatggtgatgagatt
caactctctgttgcatcatctgacaaagagaagtccgaagaacaatataaacctgatcca
ttatggtacaagatgcttggtctggcaaacaaaaagaaaatttttgtcccagatgaagtg
ggtggacatacaattctgactgtgacaaccgatgatataatagacattgtgaagaacaaa
gtcagtgtagacactaatttagtgattcaggactgggagaagaggcaaatatccaggttc
agagatgatccgcctggacagacatgcagtcaagctgtccaaaggctgacagagtttact
aagaatgtgtcatcaggcactgtgcctctggaatttgtgggcccagccaaagatatacat
ttgaagaactttgacgtactacagaaactgaatgatctagagcagaagttaaatgattgc
acgagcatgaatattgccaactttgaacaactgtttaaagaagtattcagatgtaagcaa
ctggaacagaagagagaagatttgctgtacaagaaatcacccagaagcctatcactgtat
ccagagtttaaagaaagagtatgtgtgcttcaagaacttgggtacatagacaaaaataat
tcagtccagctgaagggacgggttgcttgtgaaatggggaatcatgagctgatgatcact
gaaatggtgctgcattgcgtcttggctgataagcaaccagctgagatagctgcactgctg
tcatgtcttgtcttccagcagaaaagaaaaactgaaccagttctaacagagacacttaaa
aagggtgtacgacagattgaagaaatagcaaaaaatgtggaatgtatggagaggaagtat
ggcatagagtcaggacacgataaactgaactctgggctcgtggaggttgtgtatgaatgg
gctcaaggaaaacctttttgtgagattatgcagttaactgatgacgtccaggaaggcatc
attgtgcggtgtatccagcagttaaatgaaacattatgtgatgtgaagaatgctgcccac
cgaattggagatccagcacttaaacagaagatgcaggaagcatcagatgctatcaagaga
gacattgtatttgttgctagtctgtatacaagtgaagacaatcctaaacccagtctgtag
DBGET
integrated database retrieval system
