Cryptotermes secundus (drywood termite): 111864834
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Entry
111864834 CDS
T07421
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111864834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csec03019
]
111864834
Messenger RNA biogenesis [BR:
csec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111864834
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111864834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
CNOT1_CAF1_bind
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
111864834
NCBI-ProteinID:
XP_033607491
LinkDB
All DBs
Position
Unknown
AA seq
2449 aa
AA seq
DB search
MNLDSLSFALSQISYLVANLTKKNYKQSTQELSHLVTSYGLEADRHLLRCLFSHIDFSAE
GSKTSSSKDFHQIQLLAQECVALLTKPTLISNLCYALDNPLHHQKALKPSAQLFSLLSKV
LKLTPVQEVVFGLALLHSSNPDTQNFASQFVKLKLPDLIRSYIDTESSSSQQEGGLHEAA
PEVLHLILTNLLYGPKDQFGIVTETRETFLKSLRRDFPRELVPVVLAPLLYPNKPDLPMD
KVNQDNSTMTNTMLDGSLADLIMEIGYGFCSSLEECRNSLVNLGACEMSPPAVARVLGMM
VRTHTGLEEQVALQNIQTPASFWSSAGDSGSKDKGTTDANHPTSWNVEIFVQTVKELVPN
LPWKDIILELDHTEFVVKDRQGLTLLFTGLRLGLQSHGFHSEMFPVDLLYRHWKNADGQF
SLVQQILKNPDVFCFADYPFHSVAVDILKAPPESDNKEITTWRSLDLVETLLYLSDRGLY
SQVQEMFKLPIQHCPDVLVLALLQINPPVTVLRQELLTNLIPIFLGNHPNSAIILHHAWH
SQNISIKPIIMHAMAEWYIRGDSDQTKLSRILDVAQDLKALSMLLNAQSFPFVIDLACLA
SRREYLKLEKWLTDKIREHGEAFISACIKFLQRRCPQIMGSAVKEENLPKSAQLPHETLT
TMLACLQGCAGSVSQDLSETILTMVGNCSILLTKPRQAPPGVLRHRGIEPTFNPSTLGGQ
LFPVTQVPQVDAIANIGSSLASMSLAGAPAGMGPPSSSAFNLPGALGPLVSAPGSPSRLL
GPAAPGSSQSPFPLISLGSQLQHTGAVGTQVGPGPTATSLVPGVGVSAIGALGGRIGPQT
AVEKTRLGEASNIFPEMSQNVSKEIEDEANSYFQRIYNHPPHPTLSIDEVLEMLKKFQDS
PNKREREVFNCMLRNLFEEYKFFPQYPDKELHITAQLFGGIIERGLVSYMTLGLALRFVL
DALRKPNTSKMYYFGIAALDRFKSRLKEYHKYCEHVAAIQHFCDFPPHLIEYVEYGLQAQ
EPPNRPQGSVLPVTLQSILTPIPASTTAYKTNTSTTVTTTTTVAKTPTTTPAIATRPSIA
NATNIDTLLVATEKEDKMTAPPEALQDKIGFVFNNLSQLNLQTKCDELRDIVTEEYWPWM
AQYLVMKRASIELNFHTLYSNFLDVLKIPELNQMVLRETFRNIKVLLRSDKGIANFSDRS
LLKNLGHWLGMLTLAKSRPILQVDIDLKALLAEAYHKGQQELLYVVPFVAKVLESCSKSK
VFKPPNPWTMCIMNVLAELHQEADLKLNLKFEIEVLCKNLNIDVVDLKPSVYLKDQEKLR
NLEYQLSHPNKKPEPSAPPAMSQSPAQQPQQQPAPAATSAASAASAEEVSQVAISSSATP
PTSVAPTNTTPTSSVPSGPPDPRFSYMDISVTGIGNLAPHVSVNGQVVLFQAHPQLKQFI
RPAVERAVQEWIHPVVDRSIKIALTTCEQIVKKDFALDPDESRMRASAHHMVRNLTAGMA
MITCRDQLLVSISTNLKQTFLSALMGATPQQKELVEQAATAAAQDNMELACAFIQKTAIE
KAIPEIDKRLLTEFELRKHARNEGRRYCDPLVLTYQAERMPEQIRLKVGGVTSQQMAVYE
EFARNIPGFLPLTDRDAALFIPKNVAQDSNPSGTPFQNTAPSQLTYGTDELGAVFEKITN
DLEHYLQNIIGNQGVIPSNCQVSSLHSLLEALIIARKSRDAMSAVSLLQKAVEGMLDCLT
SMPNDPELMIRYRDIHLRVLKALQDPRAYGVQWTNKQVTRCLMECREEFRYNVDAIDCLI
RSHLVNLQQYDLHLAHSMDNGLNYMAVAFSMQLVQLYLVDERLNSTVTESDLYHTIEMLA
RIATHSRQPPDGLTTLIELLRANHDPGVLVDRAQGGPTAHIHSGILQVRARDFDDPPGLM
EKTEYLLREWISIHYSATAGRDPTRAFSIFVQQVWPIAMNGHGILKTDDLITRFFRLSTQ
MCVDLCYRFLAETPNTPTLVRTKCFHTLDAFVRLIALLVKHSGDASNTNTKINLLNKVLG
IVAGVLLQDHDNRLAEFQQLPYHRIFIMLFLELNAPEAVLEAINYQVLTAFCHTLHILRP
AKAPGFAYAWLELVSHRVFIGRMLSVTPQQKGWGMYAQLLIDLFKFLAPFLRNAELAKPV
TLLYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQMRNVILSAFPRNMRLPDPFTP
NLKVDMLPEIAHAPRLLTNFASMIQPVSFKKDLDSYLKARAPVTFLSELRSNLQVSNEPG
MCYNIPLMNALVLYVGTQAITFIRNKGLTPNMSTIAHSSHMDIFQNLAVDLDTEGRYLFL
NAIANQLRYPNSHTHYFSCTLLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFI
ELIKNPTYKFWNHEFVHCAPEIEKLFESVARSCMVQKQVQPPQENELAE
NT seq
7350 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggactcgttgtcttttgctttgtcacaaataagttatttggttgcaaattta
acaaagaaaaattacaaacaaagtactcaggagttatcacatttggtgacatcgtacggt
ctcgaggcagatagacacttgctgcgttgtctcttctcacacatagacttcagtgctgag
gggagcaaaaccagcagcagtaaagatttccatcagatccagctgctggcccaggagtgt
gtggctttgttaacgaagcccaccctcatctcgaatctctgttacgcgcttgataatcct
ttgcatcatcagaaggccctgaaaccttcagcacagttgttctctctgctgagcaaagta
ttgaagcttacaccagtgcaagaagtggtatttggcctagctcttctgcattcttcaaat
ccagatacgcagaattttgcttcccaatttgtgaaattaaagttacctgacttaataaga
tcatatatagacactgagagcagcagcagccaacaggagggagggctccacgaagccgct
cctgaagttttgcatttgatactgacaaatcttctttacggaccgaaggatcagttcgga
atagtaactgaaacaagagaaacattcttgaaaagtcttcgtcgtgattttcctcgagag
ctagtacctgttgtcttggctccattgttatatccaaataaaccagatctgcctatggat
aaagttaaccaagacaattcaaccatgactaacacaatgttggatggttcattagcagac
ctgatcatggagataggatatgggttctgttcatcgcttgaagagtgtcgtaatagtctt
gtgaatcttggtgcttgtgaaatgtcaccaccagcagtggctcgtgtactgggcatgatg
gttcgcacacacacgggccttgaggagcaggtggccctgcaaaatatccagactcccgcc
agcttctggagcagtgctggagattcaggttcaaaagacaagggaaccacagatgccaat
catcctacttcatggaacgtagaaatatttgtacagacggtgaaggaactggttccaaat
ttgccttggaaagatatcattctggagctggaccacacagaatttgtagtgaaagacagg
caaggattgactcttctgtttactggcctcagactgggacttcagagtcatggattccat
tcagaaatgtttcccgtagatctcttgtacaggcattggaagaatgcagatggccagttt
tcgttggttcagcaaatattaaagaatccggatgtgttttgttttgctgattatccattc
cattcagtggctgtggacatcttaaaagctccgcctgaaagcgataataaggaaatcacc
acttggaggtcactagatctggtggagaccttactctacctgtctgaccgtggtctctac
tcacaagttcaagaaatgttcaaattaccaatacagcactgtccagacgttctggtgttg
gcactcctgcagatcaatcctccagttactgtgttacgtcaagaattactcacaaatttg
atacctatatttttgggaaatcatccaaactcggccatcatactgcatcatgcatggcat
tcccagaatatttcaatcaaaccaattataatgcatgctatggcagagtggtatatcaga
ggggatagtgaccagacaaaattgtctcgcattttggatgtcgcgcaggatctgaaggca
ttgtcgatgttgctgaatgctcagtcctttccgtttgttatcgatttggcatgtcttgca
tcacgacgagaatacctgaaactggagaagtggctgactgacaaaatccgcgaacacgga
gaggcgttcatctcggcctgcataaagttcctgcagcggcggtgtccgcagataatgggg
agtgctgtgaaggaggaaaacctgccaaaatcagcgcagctacctcatgaaacattaaca
acaatgttagcgtgtcttcagggatgtgcagggagtgtctcgcaggacttgtctgaaaca
atcttgacgatggtggggaattgcagcatattgctaactaaacctcgacaagcacctcct
ggagtcctgcgacacagaggcatagaaccaacattcaacccatcaacactcggaggacag
ttgtttcctgtgacccaggtcccacaagtggacgctatagcgaatattggttcaagtttg
gccagtatgagtcttgctggtgctccagcaggtatgggaccccctagcagctcagctttc
aacctaccaggtgcattgggtccattggtttcagcaccaggatccccctccagacttttg
ggtcctgctgccccaggttcttcacagagtccatttcccctcatttcgttagggtctcag
ttgcagcacacaggagctgttggaacccaggttggaccgggaccgactgccacatctctt
gttcccggtgttggggtcagtgcgattggggcacttggaggacgcataggcccacagact
gcggtggaaaagacacgactaggtgaagcttcaaacatcttcccagaaatgtcgcagaat
gtgtcaaaggaaattgaagatgaagcaaatagctacttccagcgaatttacaaccaccca
ccacacccaaccttatcaattgatgaggtcttagaaatgctgaaaaagtttcaagattca
cccaacaagcgagaacgagaggtcttcaactgcatgttgcggaacctctttgaagagtac
aagtttttccctcagtatccagacaaggaactacatatcactgctcagttgtttggtggt
attattgaacgaggtcttgtcagttatatgacgcttgggctggcactgcgatttgtactg
gatgccctcaggaaaccgaatacaagcaaaatgtactactttggaattgcagcacttgat
agattcaaatctcggttgaaggagtatcacaaatattgtgaacatgtggctgcaatccag
catttttgtgacttcccccctcacctgattgagtatgtggaatatggcctgcaagcccaa
gagcctccaaataggccccaaggttctgttctcccagttactctgcagtcaatcttgact
ccaatcccggcctccacaactgcatacaaaacaaatacctcaacgacggtgaccactaca
acaacagtagctaaaacaccaacaaccacgccagcaatagcaacacgaccatcgattgca
aatgccacaaacatcgatacattgttggtagcaactgaaaaggaagacaaaatgacagct
ccccctgaagcccttcaggacaaaattggttttgtcttcaataacctaagtcagctgaat
ttacagacaaagtgtgatgagctgcgagatattgtgacagaggaatattggccctggatg
gcccagtatttagtgatgaagcgagccagcatagaacttaacttccacacactgtattca
aattttctggacgtcttgaagataccggaactcaatcagatggtgctacgagagacattt
cgaaatatcaaagtcctgttacgaagtgacaagggtattgcaaacttctctgaccgatcc
ttgttgaagaatctgggacattggcttggaatgttgactcttgcaaagagccgtcccatt
ctgcaggttgacatagatttgaaagccttgcttgctgaggcatatcacaaaggacaacag
gaactcctgtatgttgtaccgtttgttgctaaagtactggaatcatgttcaaaaagtaag
gtgttcaaacccccaaacccatggactatgtgtattatgaatgttctggcagagttgcat
caagaggcagacctcaagctgaacttgaagtttgaaattgaagttctatgcaagaatttg
aacatcgatgtcgtcgacctgaagccttctgtatatctgaaggaccaggagaagctgagg
aacttggagtatcagttgtcacatcccaataagaaaccagaaccctctgccccaccagcc
atgtcacagtctccagcccagcagccacagcagcaaccagctccggccgccacatcagct
gcatctgcggcatctgcagaagaggtgtcccaagttgcgatctcatcctcagcaacgcct
cccacttctgtggcaccgacaaacactacacctacttccagcgtgccatctgggccacca
gatcctcggttcagttacatggatatcagcgttacaggaattggcaatctcgcacctcat
gtatcagtcaatggacaagtggttttgttccaagctcaccctcaactgaagcagttcatt
cgtccagcagtagagagggcagtacaggaatggattcacccggttgtggatcgctccatc
aagatagcactcaccacgtgtgaacagatagtgaagaaagattttgccttagatccagat
gagtcccgtatgcgagcatctgcgcatcacatggttcgaaacctgactgcaggaatggcc
atgatcacatgtcgtgaccagttgctggtgtcaattagtacaaacctgaagcaaacattt
ttatctgcacttatgggtgccacacctcagcagaaagaattggtggagcaggctgcaaca
gctgcagctcaggacaacatggagttggcctgtgctttcattcagaagacggccatcgag
aaagcgattcctgaaatagacaagcgacttctaacagagtttgaattacgaaaacatgca
cgcaatgaaggtcggcgctactgcgatcctctagtacttacatatcaggctgagcgcatg
ccagaacagattcgcctgaaagtggggggagttacgtctcagcagatggcagtctatgaa
gaatttgcacgtaacattcccggctttctccctctgacggaccgagacgctgccttgttc
atccccaaaaatgttgcgcaggactcgaacccatcagggacaccattccaaaatacagca
ccctcccaactgacatatggaacagacgagcttggtgcagtgtttgagaaaattacaaat
gatttagaacattatctccaaaacataattggaaatcagggagtgataccatcaaattgc
caggttagcagcctgcacagtctgttggaggcactgataattgccaggaaatcgagagat
gccatgtcggccgtttctctgctgcaaaaggctgttgaaggaatgttggattgtttgacc
tcaatgccaaatgacccagaactgatgataagatatcgggacattcacctcagagtcttg
aaagctctccaagatccgagagcttacggcgtgcagtggactaacaaacaggtgaccagg
tgtttgatggagtgtcgagaagagttcagatacaatgttgatgccatagactgtctcatt
cggtcacacttggtcaatctgcagcagtatgatttgcatttagcgcactctatggataat
ggcttgaactacatggccgttgcattttccatgcagttggtgcagctctaccttgtggat
gaacgcttgaacagcactgtcacagagagcgatctctatcatactatcgagatgttggca
cgtattgccacgcactccaggcagcctcccgatgggttaacgaccctgattgaattgctt
cgagccaatcatgatcctggtgtcctagtcgaccgagctcagggaggacctacagcacat
attcattcaggaatcttgcaagtcagggctcgagactttgacgatcctcccggtctgatg
gagaaaactgaatatttgctgcgggagtggatatccatacattattccgctacggctgga
agagacccaacgagagccttcagtatatttgtgcaacaggtatggcctattgctatgaac
ggccatggaatcctgaaaactgatgaccttatcacacggtttttccgtctcagcactcag
atgtgtgttgatttatgttaccggttccttgctgagacgcccaacactccaactttagtt
cgcacaaaatgtttccacacactcgatgcttttgtgcgtctcattgcattactggtgaaa
cactcgggcgatgcttcaaacacaaatacgaaaatcaacctgctaaacaaagtgttgggt
attgttgccggagtgctgctgcaagaccacgacaatcgcctagcagagttccagcagctg
ccttatcatcgaatcttcatcatgctgtttctggagctgaacgcacctgaagcagtcctt
gaggccatcaactaccaggttctcacagcgttctgccacacactgcatattttgaggcct
gccaaagctccgggctttgcgtatgcatggctcgaacttgtctcccacagagtgttcatt
gggcggatgttgtccgtcactccacagcagaagggttggggaatgtacgctcagcttctc
atcgacttgttcaagttcctggctccgtttcttcgcaatgcagaacttgcaaagcctgtc
acactgttgtacaaaggaaccctgagagtcttgctggtgctcctgcacgacttcccagaa
tttctctgtgactatcactacggcttctgtgatgtaattccacctaactgcattcagatg
cggaacgtgatcctgtcggcatttcccaggaacatgcggcttcctgaccccttcacaccg
aacttgaaagttgacatgctgcccgagatagctcacgccccccggcttctgaccaacttt
gcatcgatgatacagcctgtgagctttaagaaggatctggactcatacctcaaggcacga
gctccagtgacattcttgtcggagttacgcagcaacttgcaggtgtcgaatgagccagga
atgtgttacaatattcctctgatgaatgccctcgtgctgtacgtcggcacgcaagccatc
accttcatccgcaacaaagggctaactccaaacatgtcaaccattgcacattcatctcac
atggatatatttcagaatttggctgtggatcttgatacggaagggaggtatctcttcctt
aatgctattgccaatcagctgcgttacccaaacagccacacgcactacttcagctgtacc
ctcctgtatttgtttgctgaagcgaacacagaagcaatccaggagcaaatcacaagggtg
ctgttggagcgactgattgtaaacaggcctcatccctggggtcttctcattacattcatt
gagcttatcaagaatccaacttacaagttctggaatcatgagtttgtgcattgtgcgcca
gaaattgagaagttgtttgagtcagtggctcgatcttgcatggtgcagaagcaggtgcaa
cccccgcaggagaatgagttggcagaataa
DBGET
integrated database retrieval system
