Cryptotermes secundus (drywood termite): 111865626
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Entry
111865626 CDS
T07421
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03020
RNA polymerase
csec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111865626
09124 Replication and repair
03420 Nucleotide excision repair
111865626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csec03021
]
111865626
03400 DNA repair and recombination proteins [BR:
csec03400
]
111865626
Enzymes [BR:
csec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111865626
Transcription machinery [BR:
csec03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111865626
DNA repair and recombination proteins [BR:
csec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111865626
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
111865626
NCBI-ProteinID:
XP_023709573
LinkDB
All DBs
Position
Unknown
AA seq
1904 aa
AA seq
DB search
MAFLDSKAPLRTVKRVQFGILAPDEIRRMSVTEGGIRFPETYEGGRPKLQGLMDPRQGVM
DRNSRCQTCAGNQTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKMLVSPANPK
IKEVVMKSKGQPRKRLTFVYDLCKGKNICEGGDEMDIHKENPDDPNNQQPRKQGHGGCGR
YQPNIRRTGLDLTAEWKHVNEDSQEKKISLNAERVWEILRHITDEECYILGMDPKFARPD
WMIVTVLPVPPLSVRPAVVMYGSARNQDDLTHKLADIIKANNELIRNEQAGAAAHVISEN
IKMLQFHVATLVDNDMPGLPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTV
ITPDPNLRIDQVGVPRSIAQNMTFPEIVTPFNIDKMQELVRRGNSQYPGAKYIVRDNGER
IDLRFHPKSSDLHLQCGYKVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNL
SCTSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVR
KMTKRDVFLEKEQMMNLLMFLPIWDGKMPQPAIMKPKPLWTGKQVFSLIIPGNVNMIRTH
STHPDEEDDGPFKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCG
QFYGNIQTVVNNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELE
PTPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIA
CVGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFFFHAMGGREG
LIDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNL
PTIKLSNKSFEKKFKFDPTNERYLRRIFNEDILKELMGSSDVISELEKEWEQLMKDREAL
RQIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPLRVIQGVNDLLKKCIIVAGD
DHLSKQANENATLLFQCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVSPGEM
VGALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGA
AARDAEKAKNVLCRLEHTTLRKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTR
ISPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDD
NKFQDEEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIIVTDTG
EFKAIAEWLLETDGTSMMKVLSERDVDTNRTFSNDICEIFSVLGIEAVRKSVEKEMNTVL
QFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLMDAASHA
EVDPMRGVSENIIMGQLPRLGTGAFDLLLDAEKCKAGIEIPMSMGAGMMGGGMFFGSAAS
PSMSPHMTPWNQGATPAYVSSWSPGNMLGSGATPGGPSFSPSGASDASGLSPGYSPYSPQ
PGSPSSPGPVMSPYIPSPVSGMSPSYSPSSPAYAPSPSLTPSSPNYSPTSPSYSPTSPNY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPASPSYIPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSPSYSPTSPSYSPSSPNYTP
ASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFPGSSPQYTPASPQ
YSPTSPTYSPTSPSYSPSSPQHTPSASTHYSPTSPNYSPTSPTYSPTSPQYSPSSSKYSP
TSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTSPAYETND
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttttagattccaaagccccgcttcgtactgttaagcgggtgcaatttggaata
ttggctccagatgaaattcgccgtatgtcagtaacagagggaggcattcgtttccctgaa
acatatgaaggtggaagaccaaaacttcaaggtcttatggaccctcggcaaggtgttatg
gataggaattctcgttgccaaacttgcgctggtaaccagactgaatgtcctgggcacttt
ggacatatagatctggctaaacctgttttccatgttggttttattacaaagacgattaaa
atcttacgatgtgtatgtttttattgctccaagatgcttgttagtccggcaaaccctaag
atcaaagaagttgtgatgaaatcaaaaggccaacccaggaaacgtctgacgtttgtatat
gatctttgcaaaggcaaaaatatttgtgagggaggtgatgaaatggatattcacaaagag
aatcctgatgatccaaacaaccagcagcctcgcaaacaaggacatggaggctgtggtcgt
taccaaccaaacattagaagaacagggcttgacctgactgctgagtggaagcatgtgaat
gaagattcgcaagaaaagaaaataagtttgaatgctgaaagggtgtgggagattctcagg
cacataacagatgaagaatgttacatcttgggaatggatccaaagtttgctcgacccgac
tggatgatagtaacagttttgcccgttccacccttgtcagttcggcctgctgtcgtcatg
tatggctcagcaagaaatcaggatgatttgacccataaacttgcagacattataaaagca
aacaatgaattaataagaaatgagcaagcaggagctgcagcgcatgtcatctcagaaaac
ataaaaatgcttcagttccatgtggctacacttgttgataatgacatgccaggtttgcca
agagcaatgcaaaaatcgggaaaaccattgaaagcaatcaaggcacgtctaaagggaaag
gaaggccgtatccgtggtaacttgatggggaaacgagttgacttctctgcccgaactgta
attacacctgatccaaatctccgtattgaccaggtcggagttcctcgatctattgcacag
aacatgacatttccagaaattgtgacgccgttcaatattgacaaaatgcaggagttggtg
cgcagaggaaactcgcagtacccaggagcaaaatatattgtgcgagacaatggtgaacga
attgatctacgttttcatccaaaatcatctgatcttcacctgcagtgtggttataaagta
gaacgacacatccgtgatggtgacttggttatattcaaccgtcagccaacactacacaaa
atgtccatgatgggccacagggtcaaagttttgccttggtcaacattcaggatgaatctc
agctgcacatcgccatacaatgctgactttgatggtgatgaaatgaatcttcatgttcca
caatcaatggagacacgagccgaggtggagaatatacatgtaacaccacgccagatcatt
acaccacaggccaacaaacctgtaatgggtattgtgcaggacacacttacagctgttagg
aagatgacaaagcgagatgtcttccttgagaaggaacaaatgatgaatctcttgatgttt
cttcccatttgggatggaaaaatgccacagccagcaataatgaaaccaaaacctttgtgg
acaggaaaacaggttttctcccttattatcccaggaaatgtaaacatgatccgaacacat
tcaacacatccagatgaagaagatgatggtccattcaaatggatttctccaggggacact
aaggttatggtagaacatggtgaacttgtcatgggtattttgtgcaagaaaacccttgga
acatctgctggatccttgctgcacatctgtatgttggagttaggtcatgaagtatgtggt
cagttctatggaaacattcagactgttgtgaacaattggttgcttcttgaaggtcactct
attggtattggagacaccattgctgatccccagacatacttagaaattcagaaagctatc
aagaaagctaaggaggatgtgatagaagttatccaaaaagcacacaacatggaacttgag
cctacacctggcaacactctgaggcagacttttgagaatcaggtgaaccgcattctgaat
gatgctcgagataagacaggaggctcagcgaagaaatctctaacagaatacaacaacttg
aaagctatggtggtgtctggatcaaaggggtcaaacattaacatctcacaggttattgct
tgtgtgggtcaacagaacgttgaaggtaaacgtattccttttggatttcggaagcggacg
ttaccccacttcatcaaagatgactatggtccagaatcaagaggttttgtagaaaactca
tacctggctgggcttactccttcagagttctttttccatgctatgggaggaagagaaggt
cttattgatacagctgttaagacagctgaaacaggatatatacagcgtcgtctcatcaag
gctatggagtctgtcatggttcattatgatggaacagttcgtaactcagtgggacagttg
attcagttgcggtatggtgaagatggtctttgtggagaaactgttgaatttcagaatcta
cccacaataaaattgtcaaataagtccttcgagaagaagttcaaatttgatccaacaaat
gaaagatacttacgtagaatcttcaatgaggatattctgaaggaactcatgggtagtagt
gatgtaatatcagagttagagaaagagtgggaacaactcatgaaagatcgtgaagcacta
cgacaaatcttccccagtggagagagcaaagtggtattgccatgcaacctgcagcgtatg
atttggaatgttcagaaaatctttcatattaataaacgtgcacctactgacctgagtcca
ctaagggtcattcaaggtgtaaatgatcttttgaagaagtgcatcattgtggctggtgat
gaccacctgagcaaacaggccaatgagaatgcaactttgcttttccaatgccttgtgcgc
tccactctctgcaccaaatgtgtttctgaggagttcagattatcttctgaggcatttgag
tggcttataggtgaaattgagacaagatttcaacaggctcaggttagtccaggtgagatg
gtaggagcattggctgcccagtcattgggagagcctgctacacagatgacactgaacact
ttccactttgctggtgtatcctccaagaatgtaacactgggtgtaccccgcctgaaagaa
atcatcaacatcagcaagaagcccaaagctccttcacttacagtgttccttactggtgca
gccgccagagatgccgagaaggctaagaatgtcctgtgtcgcttggagcacactacattg
agaaaggtgacagcaaatactgctatttattatgatccagatcctcagaacactgtgatt
gcagaggatcaggagtttgtaaatgtctactatgagatgcctgactttgatccaacacgc
atttctccctggttgctgcgaattgaacttgaccgaaagagaatgacagacaagaaattg
actatggaacagattgctgaaaagataaatgctggttttggtgatgatctcaattgcatt
ttcaatgatgacaatgcagagaaattagtgttacgtatccgtatcatgaacagtgatgat
aacaaattccaggatgaagaagaaactgtagacaaaatggaagacgacatgtttcttcga
tgtattgaagcaaatatgttgtctgacatgacattgcagggcattgaagcgataggcaaa
gtgtacatgcatttgccccagacagactcaaaaaaacgaataatagtgactgacacagga
gagttcaaagcaattgctgagtggttattggaaactgatggcacaagtatgatgaaagtg
ctaagtgaaagggatgttgatacaaatagaactttctccaatgacatctgtgagattttc
tctgtgcttggaattgaggctgtgcgtaaatcagtggagaaagaaatgaacactgtcctg
cagttctatggtttatatgtgaactatcgacatcttgccctgttgtgtgacgtgatgact
gctaaaggccacttgatggccatcacacgtcatgggatcaacaggcaagatacaggcgca
ctcatgagatgttcatttgaagaaacagttgatgtattgatggacgcagcatcacatgct
gaagtagaccccatgagaggtgtttcagagaacatcattatgggacaacttccccgtcta
ggcacaggagcatttgatttgctgcttgatgcagagaagtgcaaagcaggtatagaaata
ccaatgagcatgggtgcaggcatgatgggaggaggtatgttctttggtagtgcagcatca
ccatccatgagtcctcatatgactccatggaaccagggtgcaactccagcgtatgtcagc
tcatggtctccaggcaatatgttgggcagtggtgcaactccaggtggaccaagcttctca
ccatcaggtgccagtgatgcaagtggtctttcacctggatattcaccttattccccacaa
cctggaagtccatcttcacctggtccagtaatgagtccatacattccaagcccagtaagt
ggcatgtcaccaagttactcaccgtcaagtcctgcatatgctccgtcacccagcctgaca
ccatcaagtccaaattacagtccaacaagtccatcatattcccccacttcaccaaattat
tcaccaacaagtccaagctactccccaacgagcccctcttattctccaacgtctccttca
tatagccctacttctccaagctatagtccaacaagccccagctacagccctaccagtcca
tcctatagtccaactagtccatcatattcaccaacatctccaagctacagtccaacatct
ccaagttacagtccagcgagtcccagttatatcccaactagtccatcctattcaccaaca
agcccaagttactctcctacaagtccttcatattctccaaccagcccatcttattcacca
agtccatcttacagtccaacaagtccaagttattctccaagttcacctaactacacacct
gcctctccttcatattcaccaaccagtccaagctattctccaagttcaccacagtattca
cctgctagccccagttattcacctagcagtcccaagtactcaccaacatctccatcctat
tctccaacctcaccttctttccctggctcatctccacagtacactccagcatcaccacag
tattcacccactagcccaacatatagcccaacaagtccatcatattctcccagctcacca
caacatacacctagtgcctccacacattactcacctacttcgccaaattattctccaact
agccctacctactccccaacaagtccacagtattcaccatcaagctccaagtactctccc
acaagtccaacatatacccctacttctcccaactatagcccttcatcacctacatattcg
cctgctgtgccaggttactctcctacctctcccacctattctccaacatctccagcatat
gagactaatgactga
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integrated database retrieval system
