Cryptotermes secundus (drywood termite): 111865825
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Entry
111865825 CDS
T07421
Name
(RefSeq) SR-related and CTD-associated factor 4
KO
K13191
RNA-binding protein 16
Organism
csec
Cryptotermes secundus (drywood termite)
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csec03021
]
111865825
03041 Spliceosome [BR:
csec03041
]
111865825
Transcription machinery [BR:
csec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111865825
Spliceosome [BR:
csec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111865825
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
111865825
NCBI-ProteinID:
XP_023709929
LinkDB
All DBs
Position
Unknown
AA seq
1559 aa
AA seq
DB search
MDAVKAFNAELSALYEVKPPISKAKMTSITRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGPEKDVFAPRFAKNMQTTFINLFRCPPEDKSKVIRVLNLWQKN
SVFQSEVIQPLFDLADPNHPIHKEQQTAVSNTSNGSISGILNLSTVNKTPSSAANRTPSN
LSKTPMNAGKPEATSTPMWLNMNQSQMEVTSTTLMQLSGQAGMNLLSGKSQTSNQTSNNV
DANIIQQLQHLQQLLMKQQDSSARQETDQVKFDKKLLDFDYGSDDDDDNAPSPQPQQSTG
LESILANPEVMRQLQNLQQQMSQQQMKQQQHEMEEKLRKLQEMKQQEEEFDKHLAQTLPN
LPFASECELKPMDTVQPPPQVMRYEQHDFEQHKPAYTFPVMDMTQPPPGYPPTLPADHSV
GGHSSLQKESPLEDGEQADSEVEFVERTGPDTNSIEIINLDRSRSRSPSLSNSKIYRRRR
SRSRSRDRRRGRRSRSRSVSDGGRSRSRSRRRRTRSRERDREREKEREREREKEREKERE
RRKRGLPPIKKDHLCVCSTTLWVGHLSKLVHQEELSDTFGEYGDIVSIDLIPPRGCAFIC
MNRRQDAYRALQRLKNHKLQGKAITMAWAPGKGVKGKEWKDYWEVDFGVSYIPWAKLTRE
SDLDALEEGGMIDEETVPEWIKSHMQQQQQQQQQEQQQQGSVPSTPVLGPDQIGPADMGV
AAPPPGFIPLPEGLPVPATTSVAQGVGVDTSQPPPLRPPEGGLPAPGLPGIPAGMPGTIT
GVPPPGALPMVSPFALPSVPPPMGMAMGHGMMPNVPIGVPPPAMQGLLMPPTGQMMHQQM
IGGVPQPVNSPFNAGPGAPVSIITGPHPHGQLSQIPLPAPAAPQDKPNTGLPHTAPPVGV
PPPTSEASLPGLSEAMMRVPFGVPPGMHPQVRNIPLQVNADDGNMEVDISQGEQPKTTEQ
TDGVVRINDPMLAALGGRGAPPFGHPLVGQPMQQGLPPHLTTLQPPPLQQQMQQPPPLQQ
QDQQQSQMQSSQSSQPAAAEQSQQKDSSSSKFSQDQDSSRDDSEFAERNRNRERRDRERD
RDRDRDRDRDRDRDRDRERDRDRDKDRDRDRGRDRDRDRDRDRDRDRDRERDRERSRWGD
RDRDRDKGRDRDRERDRDRDRDRERERDRDRDWREPQHHNEDRQQVPSPWADQVPPQQQQ
GEKSEKPSLLERLRNLANDGHTGIDRDDSRSSFGGRDPRPPPPSRRDRSSSAERSSDREG
SSAGANAPPSLLDLPKIPPPAVQEGGSDRKPHTTDSHQGPPGPRFQSPRGPPGPGGPVFS
PRGPGPDGFRPPGPGFRPDGVRPPGPFPRGGPLPEGMIVSPGMDRHPEGYGRDVFEPRDS
RPEEFDSENEDFDSRHPRAEGSQGPRPEGFDKRIPHPDEYEGFGPRGPPHPDDFDIHPPV
PDDFNPRGIHPDEFEPRGRRPPDVFDPRGPPREGFDPRMSHPEDFDPRGPRPDGFDRRGR
APGPDFFPRREFGPRGMMGPRMGMGPDGFGPRHLLGRGPDVDLLHENTLLPVMLMLSFV
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagtaaaagcattcaacgcggagctttccgccttgtatgaggtcaaacctcca
atttccaaagcaaagatgacatcgatcacaagaggcgcaattaaagctattaaattctac
aagcatgttgtacagagcgtagagaaatttatacagaagtgcaaacctgaatataaagta
cctggcctctatgtgatcgattcaatagttcggcagtctaggcaccagttcggcccagaa
aaagatgtttttgcgcctcgatttgcgaagaacatgcagacaacttttataaatctcttc
agatgtcccccagaagataagagtaaggtaattcgagtactgaatctctggcagaagaat
tcagttttccagtcagaagtaattcaaccactgtttgatcttgcggatccaaaccaccca
atccacaaggaacaacaaacagctgtatcaaatacaagtaatgggtcgatatcagggatt
ctgaatttgagcactgtgaacaagactccatcctctgctgcgaacagaacaccatctaac
ctcagcaaaactcctatgaatgctgggaaaccagaggctacaagtacacctatgtggctg
aatatgaatcagtcacagatggaggtaaccagcaccactctgatgcagttgtcaggacaa
gcaggaatgaatctcttgtccggaaaatctcagacgtcaaaccaaacgagtaacaacgtg
gatgcaaatataatccagcagttgcagcatttgcagcagttgcttatgaagcagcaggac
tcgtcagctcggcaggaaacggaccaagtgaaatttgacaagaagctcttggactttgac
tatgggtcagatgatgatgatgacaatgctccatccccacagccacaacagtcaactggc
ctagaaagcatactggcaaacccagaagtcatgcggcagctgcagaatttacagcagcaa
atgagtcaacagcagatgaaacagcagcagcatgagatggaggaaaagctgcggaaactg
caagagatgaagcagcaggaggaagagttcgacaaacatctggctcaaactcttcctaat
cttccctttgcttcggaatgtgaattgaaaccaatggacactgtacagccacctccacaa
gttatgcgatatgaacagcatgactttgagcaacataagccggcatatacatttcctgta
atggacatgacacagcctcccccgggatacccgccaacccttccagctgaccactcagta
gggggacattcttcgctacagaaagagagccctcttgaagatggcgagcaagcagattct
gaggtggaatttgtggaaagaacaggccctgatacaaactctatagaaattatcaactta
gaccgaagtcgttcaagaagcccatcgttgagcaactccaaaatataccggcggcggcgg
agtcgatcaaggtctcgagaccgcaggcgtggaaggaggtcacgatcaagatctgtttct
gatggaggaaggtcacggtcccgatctcggcgtaggaggacaaggtctcgagaaagagac
cgtgaaagagagaaagaacgagagcgggaaagagagaaggaacgagagaaggaaagagag
aggagaaaacgagggttacctcctatcaagaaggatcatttgtgtgtatgcagtaccact
ctttgggttgggcacctgtcaaagttggtgcaccaggaagaactatcggatacatttggt
gaatatggagacatcgtgtccatcgacttgatccctccgagaggctgtgcatttatatgt
atgaatcgccgacaagatgcataccgagctttgcagaggctaaaaaatcacaagttgcag
ggcaaagccatcacgatggcctgggctcctggtaaaggagtgaaggggaaggagtggaag
gactactgggaagtggactttggtgtgtcttacatcccttgggcaaaacttactcgggaa
tctgatttggatgccttggaggaagggggcatgattgatgaagaaactgttccagagtgg
attaagagccacatgcagcaacagcagcagcaacaacaacaggagcagcagcagcagggc
tctgttccatccactccagtgcttggtcctgaccagataggtcctgcagatatgggagtg
gcagcaccccctcctggcttcattcctcttcctgaaggtttgcctgttcctgccaccact
tcagtggcgcaaggcgtaggagttgacacatcacaacctcctccccttcgaccaccagag
ggaggattacctgcaccaggactaccaggaattccagctggaatgccaggaacaataaca
ggtgtaccaccacctggtgcattgcctatggtatcaccctttgctcttcccagcgtacct
cctccaatgggcatggcaatgggccatggaatgatgcccaatgtcccaatcggtgttcca
cctccagccatgcagggactgctgatgccacctactggacagatgatgcatcaacagatg
attggtggggtacctcagcctgtgaactctcccttcaatgcaggccctggtgccccagtg
agtataataactgggccccacccccacggccagttaagtcagatccctctgcctgctcct
gcagcccctcaggataaacctaacactggacttccccacacagcaccacctgttggagtg
ccacctcccacgtctgaggccagtcttccagggctgagtgaagcaatgatgcgcgtccct
tttggagttccaccagggatgcatccacaagtccgcaacattcccttgcaagtgaacgct
gatgatgggaacatggaggtggatatatctcagggtgaacaaccaaagacaactgagcaa
acagatggagtagtgaggataaatgatccaatgttggcagctttgggtggaagaggagcc
ccaccatttgggcatccacttgtaggacagccgatgcagcaaggtctccctcctcaccta
accactcttcaacctccccctctccagcagcagatgcagcaacccccaccactacagcag
caagaccagcagcagtcacagatgcaatcgtcacaatcatcgcaacctgctgcagctgag
cagtcacagcagaaggacagctccagtagcaaattcagtcaagaccaggactcctctagg
gatgacagtgaatttgcagaaagaaatcggaatcgtgagcggagagatcgggaacgtgat
cgagatcgcgaccgggaccgggaccgtgatcgcgatcgtgatcgtgacagggaaagagac
agagatcgcgataaagacagggaccgtgatcgaggcagagatagagacagggatcgtgat
cgcgatcgcgatcgtgacagagacagggagagggacagagaaagaagtcggtggggtgat
cgtgatagagatcgtgataagggcagggatcgggacagggaacgtgatcgtgatcgtgac
cgtgacagggagagagagagagacagggaccgggactggagagaacctcagcatcacaat
gaggacaggcagcaggttcctagtccatgggcagaccaggtgccacctcaacagcagcaa
ggggagaagtcggagaaaccaagtctcctggaacggctgcgtaacctggcaaatgacgga
cacactggtatcgatagggatgacagcagaagttcatttggtggccgtgaccctaggccg
ccacctccatcacgccgagacagaagttcctctgcagaacgaagcagtgacagagaggga
tcttcagcaggagcaaatgctccgccatctttattggatctccctaaaatccccccacca
gcagttcaggaaggtggttctgataggaaacctcatacaaccgatagccatcagggacct
cctggaccaaggttccagagtccaagggggccccctggaccaggtggtcctgtgttcagt
cctaggggtccggggcctgatgggttcaggccaccaggcccaggattcaggcctgatggt
gtccgaccacctggtccattccctcgaggtggacccctaccagagggtatgattgtgtct
cctggcatggatcgccatcctgaaggatatgggcgcgatgtttttgagccaagagattct
cgaccagaagaatttgattctgagaatgaagattttgattccagacatccacgagcagaa
ggttcacaagggcctcggcctgaagggtttgataaacggatacctcatcctgatgaatac
gaaggttttggccccaggggtcctccccatccagatgacttcgatattcacccgccagtc
ccagatgatttcaacccacgaggaattcatccagatgagtttgagcctcgtggtcgccgt
ccccctgatgtttttgatccaaggggaccaccaagagaagggtttgatcctcggatgtca
catccagaagactttgatcctagaggtcctagaccagatggttttgatcgcagaggacgt
gcaccgggaccagatttctttcctcgccgtgaatttggcccaagaggaatgatggggcct
cgaatgggtatgggacctgatggttttgggccacgacatttacttggacgtggaccagat
gtggatttgttgcatgagaacactttgttgcctgtgatgctaatgctgagttttgtttga
DBGET
integrated database retrieval system
