KEGG   Cryptotermes secundus (drywood termite): 111865990
Entry
111865990         CDS       T07421                                 
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
csec  Cryptotermes secundus (drywood termite)
Pathway
csec03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csec00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111865990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csec03041]
    111865990
Spliceosome [BR:csec03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    111865990
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd PRP4 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IFT140_1st WD40_like Beta-prop_SCAP Beta-prop_HPS5 Nbas_N WD_LRWD1 Beta-prop_SPT8 PurA
Other DBs
NCBI-GeneID: 111865990
NCBI-ProteinID: XP_023710214
LinkDB
Position
Unknown
AA seq 515 aa
MSDDEDILYIKKQKTIHYGSLEEQERTRLSTVVVKSGDSDEEGSSSNMGQQIAEAGNVNI
SDEYMELEEEMNRDRQALLEEFERRKRARQINVSTDDEEVKRNLRQLGEPICLFGEGPAD
RRSRLRDLLARFGEDAIKKKQEEEEERMQQEKDQETTWYHEGPEALRVSRLWIASYSLPR
AKQRLEEARKEQDLPEATRTARRQELQKKLQAVSIYCSQIGDTRPISYCQFSPDSKLLAT
ASWSGLCKVWTVPNCKLTLTLRGHDCNVGAIVFHPHAMQAEENSVCALASCASDGSVKLW
TMESEDPLADVEGHAPHRVSRLAFHPSGRFLGTCCFDGSWRLWDLEQRQEVLHQEGHCKP
VYCISFQTDGSVCATGGLDAFGRVWDLRTGRCIMFMEGHLKSLYGIDFSPNGYHIATGSE
DNTCKIWDLRRRACLYTIPAHMNLLSQVKYQYQGGNFVVTSSYDNTAKVWSNKTWQPLKT
LSGHDGKVMCVDISPDSQFIATSSYDRTFKLWATE
NT seq 1548 nt   +upstreamnt  +downstreamnt
atgtcggacgacgaagatattctctatattaaaaagcaaaagacaattcattatggctcc
ttggaagaacaagaacgcacccgcttatccacagtggttgttaaatctggagacagtgat
gaagaaggaagttcatccaatatgggacagcagattgcagaagccgggaatgtcaacatt
tcagatgaatatatggaactggaagaagaaatgaatcgtgatcggcaggctctactagaa
gagtttgaaaggcgtaaaagagcccgccagattaatgtttcaaccgatgatgaagaagtc
aagcgcaatctgcggcagttaggagagccaatttgtctgtttggtgaaggtccagctgat
agacggagtcgtcttcgagacttattagccagatttggagaagatgcaattaaaaagaaa
caagaagaggaagaagaaagaatgcaacaagaaaaagatcaggaaaccacatggtaccat
gaggggcctgaagcccttcgagtgtcacgactatggattgcaagttattcattaccacgt
gcaaaacaacgcttagaggaggctcgtaaagagcaagaccttcctgaggctacacgcaca
gccagaagacaagaattacagaagaaacttcaagcagtatcaatatactgcagtcagatc
ggagacacaagacccatctcatattgtcagttcagtcctgactctaaattgcttgctact
gcttcatggagtggattgtgtaaagtgtggacagtgcccaactgtaaactcacgttgact
ttgagaggacacgattgcaatgtaggagctatagtcttccatccccatgcaatgcaagcc
gaagaaaattcagtatgtgctcttgcatcgtgtgcttctgatgggtctgtcaaactgtgg
actatggaaagtgaggatccactggcagatgtagaaggtcatgctcctcatcgggtatca
cgacttgctttccatccttcaggccgatttttgggtacatgttgttttgatggctcttgg
aggttatgggacttggaacagcgccaggaagttctacatcaggaaggtcattgcaagcct
gtctattgtatctcctttcagacagatggttcagtatgtgctacaggtgggctggatgca
tttggacgagtgtgggacctacgtactggacggtgcatcatgttcatggaaggtcatctc
aagtcactgtatgggatagacttctctcctaatggctatcacatagccacgggaagtgaa
gataacacctgcaaaatttgggacctaaggcgacgagcatgcctgtacactattccagca
catatgaatcttctctcacaagtcaagtaccagtatcaaggaggcaattttgttgtgaca
tcatcatatgacaacacagcaaaggtgtggtccaataaaacatggcagccactgaaaacg
ttatctgggcacgatggcaaagtaatgtgtgtagacatttctcctgactcgcagttcatt
gctacatcttcatatgatcgaacattcaaactgtgggcaactgaatga

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