Cryptotermes secundus (drywood termite): 111866068
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Entry
111866068 CDS
T07421
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03030
DNA replication
csec03410
Base excision repair
csec03420
Nucleotide excision repair
csec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111866068
03410 Base excision repair
111866068
03420 Nucleotide excision repair
111866068
03430 Mismatch repair
111866068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csec03032
]
111866068
03400 DNA repair and recombination proteins [BR:
csec03400
]
111866068
DNA replication proteins [BR:
csec03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111866068
DNA repair and recombination proteins [BR:
csec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111866068
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
AAA_22
AAA_30
AAA_14
RuvB_N
AAA_18
AAA_33
Rad17
AAA_5
BRCT_2
AAA_17
nSTAND3
PTCB-BRCT
RNA_helicase
NTPase_1
Zeta_toxin
AAA_16
Sigma54_activ_2
Retro_M
AAA_19
Motif
Other DBs
NCBI-GeneID:
111866068
NCBI-ProteinID:
XP_023710381
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MSHDIRSYFPPKAGSEAKGKCKEMKVNVERRHRKRQLVCIDSDSDEDILPSQVKKHERKS
GISVSCVRGVTQKNSKSISKPELKPIDVADVFGNSQIKRTASKKDEVKKVMKNVTPQLEN
LHSDSEFVGTLQELDERKNFCKKENEITPVKEKQKHALHTSEFSKSALDSYKIPRNAMKE
TPNKTDIKLLAQKEESRDKETTSLISQPETSPDLPKKIKGNEYLSTENGTQQEKAVRSPA
SVKRCDISSDEDVYERKRQHAMQYQRYLQREGPKNPGGKEVPQGRPGCLSGLVFVVTGVL
ETIDREETSSLIKQCGGRVTSSVSRNTNYLVVGEEPGPAKIEKAAKLNTPHLTEDELFAL
IRARSCLPDTERLSKDSEEVIKKDEKIKHKDNLSRNDITHGTRIETSKSIKKNIKKEETE
MPVLEKQDISLSPPSARNTTFQRHSLWADKYKPVSTKHIIGQQGDRSNVKKLIKWLQSWH
SNHSGKKKLVRPSPWAKDETGSYFKAALLSGPPGVGKTTTAHLVCEELGFDVVEFNASDT
RSKKLLHEEVSELLNNKSLSGYFQGAAGRKPTENHVLIMDEVDGMAGNEDRGGMQELIQL
IKSSRVPVICMCNDRHHPKIRSLTNYCFDLQFSRPSVKQIGGAMMSICFKEGIKMSPETL
NDIITGTNHDVRQVLHHLSVWSVKDKQLSFENIKEESLKAKKDVKLGPWDVVKKVFSADV
HKSMSIHDKSDLFFHDYSLGPLFVQENYLGVMPHKSRNNRKRHLELVAQTAESLSSGDMV
EKTIRSKSAWSLLPAQAIFSSVLPGDLLEGHFTCQINFPAWLGKNSRRSKFQRLLQELHG
HMRLNISGSKEAVNLDYMTHLRDAISGPLIKDGVDGVPATLHVMQDYYLLREDIDSLMEL
SLWPNQKDPMSLVDSKVKAALTHRFNKGGIMTPYSIVKIKNSASKSSQDLEFDGDEQDVG
EEEEEEEGITRDAMIKVKKRNTTTQNPAPGRSGAKRRKVDNKEVRKKNDKHERK
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgatatacggtcgtattttccacctaaggctggaagtgaggcgaaaggtaaa
tgtaaagaaatgaaagttaatgtggaacgccgacatcgaaagaggcaattggtttgcata
gattcggattccgatgaggatattttaccgtcgcaggtgaagaaacacgaaagaaagagc
ggaatttcagtgagttgtgtcagaggtgttacacagaagaatagtaagagcatatccaaa
cccgaattgaaacctattgatgtagcagatgtgtttggtaacagccagattaagagaacc
gcatctaagaaggatgaggtaaagaaggtcatgaaaaatgttacacctcagctggagaat
ctgcattcagattcagaatttgtaggaacattacaagagctggatgaacggaagaacttt
tgtaaaaaggaaaatgagataacgccagtgaaagaaaagcagaaacatgcactgcataca
tcagaattcagtaaaagtgctcttgattcttataaaatacccagaaatgctatgaaagag
acaccaaataaaactgacataaaattactagctcagaaggaggagagcagagataaagaa
actaccagcctcatatcacagcctgaaacttctccagatttacccaagaaaattaaagga
aatgaatatctgagtacagaaaatggaactcaacaagagaaagctgtaaggtcaccagct
tctgtgaaaagatgtgacattagttctgatgaagatgtgtatgagagaaagaggcaacat
gctatgcaataccagagatatttacaacgagagggcccaaaaaatccaggggggaaggag
gtgccacaggggagaccaggctgcttgtcagggctggtgtttgttgtgacaggagtgttg
gagacaattgatcgagaagaaactagttctctcataaaacagtgtggtggtcgcgtgact
tccagtgttagtcgcaacaccaactaccttgttgtgggagaagaacctggtccagcaaaa
atagagaaggcagcaaaattaaacacaccacatctaaccgaagatgaactctttgctctt
attcgagcaaggtcatgcttaccagacacagaaaggctgtcaaaggattcagaggaagtt
attaaaaaggatgagaaaattaaacataaggataacttgagcagaaatgatattacacat
ggaaccagaatagagacatcgaaaagtatcaagaaaaacattaagaaagaagaaacagaa
atgcctgttctagaaaagcaagatatttcactatcacctccaagtgcaaggaacaccact
ttccaacgtcattcactgtgggctgacaaatataagcctgtatctacaaaacacatcata
gggcaacaaggtgatcgcagcaatgtgaagaagttaatcaagtggctgcaaagttggcac
tctaatcactcaggaaagaagaagcttgtaaggccaagtccatgggccaaagatgaaact
ggatcctacttcaaagctgcattgttatcaggtccaccaggtgttgggaaaacaacaact
gcacatcttgtttgtgaagaacttggatttgatgttgtggaatttaatgcatcggataca
agatcaaagaagttgctacatgaagaagtgtctgagttgctgaacaacaagtcactgtct
ggatattttcagggtgctgcaggaagaaagccaacagaaaatcatgttctgataatggat
gaagttgatggcatggcaggcaatgaggatcgaggtggcatgcaagaacttatacagttg
attaagagttctcgagtaccagtgatctgtatgtgcaatgatcgtcatcatccaaaaatc
agaagcctcacaaattattgctttgatctccagttcagtagacccagtgtcaaacaaata
gggggtgctatgatgtccatttgttttaaggagggaataaaaatgtcccctgagactttg
aatgatataatcactggtacaaatcatgatgttcgccaagtcctgcaccacctttcagtg
tggtctgtgaaagataaacagctttcttttgaaaatatcaaagaagaatctttgaaagcc
aagaaggatgttaagctggggccttgggatgtcgtgaagaaagtgttctcagcagatgtc
cacaagtcaatgtcaattcatgataagtcagacctcttcttccatgactacagtctaggg
cctctctttgtacaagagaattatttgggagtgatgccccataaaagcaggaacaacagg
aagagacatttggaacttgttgctcagacagcagagagcctcagttcaggggatatggta
gaaaaaaccatcagaagtaaaagtgcatggagtctgttgcctgcacaggccatattttca
agcgttttgcctggtgatttattggaaggccacttcacttgccaaatcaactttccagca
tggctgggaaagaactcgcgcagaagtaagttccagcgacttctgcaagaacttcatgga
catatgaggcttaatatctctggcagcaaggaagcagtcaacttggactatatgacacat
ttgcgagatgcaatatctgggcccctaattaaagatggcgtagatggagttccagctaca
cttcatgtcatgcaggactactatctgctgagagaagacatcgacagtttgatggaactc
agcttgtggcccaatcagaaagacccaatgtcccttgtcgacagcaaggttaaagcagct
ttgacacacagattcaataagggaggtatcatgacaccgtactctattgtaaaaatcaag
aactctgcatcaaagtccagccaggacttggaatttgatggtgatgagcaggatgttgga
gaggaagaggaggaggaggaaggcattacaagggatgcaatgatcaaggtcaaaaagcga
aacaccacaacacagaatcctgcaccaggaagaagtggggcaaagaggagaaaagttgat
aacaaagaagttagaaagaaaaatgataaacacgaaaggaagtag
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