Cryptotermes secundus (drywood termite): 111867245
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Entry
111867245 CDS
T07421
Name
(RefSeq) uncharacterized protein LOC111867245 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111867245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csec03021
]
111867245
03019 Messenger RNA biogenesis [BR:
csec03019
]
111867245
Transcription machinery [BR:
csec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111867245
Messenger RNA biogenesis [BR:
csec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
111867245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_helical
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
ATP-synt_D
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
111867245
NCBI-ProteinID:
XP_033608496
LinkDB
All DBs
Position
Unknown
AA seq
2000 aa
AA seq
DB search
MFKLRQTWNEVFPPKKLYAVDVRVNAIDPAWPITAVPPTIYVNPKFFRQQAPPAPNSQPS
STAVSATPPATPAVPPTAVEDPHTINEAKMREQLLKKQKELLELQQKKLELELLQTKARL
EEQQKQLERQTGHLHSEQLRPPMHIAGQEAAKLLAPPKPMESPVVSTKSQTVVPVPATVV
NTSQNSGTVTVTVPEAAGAPAGPAARGSGSASGSSKMKIETKSTGATGLKTSATSSSSST
SCRPIPTPALTAVTPGVRSRDPRLASRQLQSNAVPENSMVQPQDEEIQEPDLIFEPVKLE
TAKPKPQITINIGCVNKGTVNKETRGISKKDPRLISNKVHGLNNSNIKGRTSSATSSGVG
GKGSGKMFGRGPSPLPSSPSHPSSGGGGSKSLSSPSSSSQRKTQSKGGSNGSTKPPRNKA
LPRIIKIDLTDSPPPKAGDTKEESSTSKQNTETGNKSSSPSSKTESHRKKSLPLGTSRSS
ERKKGSGKSGSESSGMGGNSSNGSIKQEWRKSPVVGEKRHHDHDRPVSSKYDIFVEPEGD
SPSPPPPPVISTDNKRRGESSPSKGSVFKDVKLPKGRNYMRRNLAPKPRSVEIPPVTATG
DVDLRLGAPPENCPHLDMFQPDTTTSVPSAKEDVKEPLVEAANQDVDLRHLPGSPSRKRS
STERGEQPPPKKTKAEVFDELFGNEDVDLRQLPPNVPVVMQTVPPSPPPPPVISQSSPVP
TSASSQDSSVNTTSSLKQPSPERERVESEVRMDECKSVSEDDGKENCESELKSRGWAKYK
EKKPDTYKSPLRPMGRSGRDELDLQKSRSSTLGSSSQLRGRDMIYGNPRDRGLSNFHRSS
GKFDKLGQPLLYHKLPDDPGERRRSLSTAVEEDTDMRHHLFDDASDINVNMIMQEADEQL
KNGTISFSHYNTVLKQVIQLNEVQKLREAQRRDQQENKENWERSRRRRAGETGHLSPIIA
DDDRQGSSSIDARFGDIDERFPVLHKHRNLTTSLPSSSELSMPGKFQPGPSQWNDAGRPH
MRSGHWDHAPNPWIRSAHSANSVPLTQGHLGTHVRMLNPGPSQGQGIPFHQTSGPEFQPV
DSFGGVNRWRPQFQSRTPFEGDVDRFESRFSGRSDNRFRGPTPSLLQQQQIHQQQARGND
ELPPADPMILELIAQDRMRTINIDGVPREIRFYGDTAVVMLAWDDPREIGFQGGARTVTF
DERESILCSLNDTYREFIIDGCTHRIRLGAPTRELYIDGKWYECFFGGPPVTIEIDGKMH
VVKLEGPPPQVKIGLMKRTDLVAGKINLIINAKTMVPVFLDAKPQRFDIENKPHVLHFVE
ALSTVLINGQPIKVEFGGLPKPIIVRGKKHFIRFTVLPRGIRPGYVSIVNMEGGRLPSPP
RPKNENSETVTFGGDDSNDASSRFSQGHEPVLPVVGATGSLGGRGLRKQFGANRDRDLPH
ETEHVTNSPGHFHGDNAVKGPVPIQQQKHRPQSQLPLEMLMSLMPTMMAPASGFGYQVEQ
SSQDGQPGPQELPTQVPDSVPGVPEAQLHGAGLSNIPFLPAEINVAELFQRLVATGIVPQ
AAKSDADSKKEEEAKSIKAVDFGQPETLKLRQPGVVAILYSGIQCSSCGVRFPPEQTMKY
SQHLDWHFRQNRRDKDNTRKAQSRKWYYDVSDWIQFEEIEDLEERAQSWFETQQAAEGEE
KEIQEVPSVCAGENPDDTFCAVCHDKFEQFYNEEREEWHLRSALRVDGKTYHPLCYDDYK
GSLEMSLEEQYATEDTKDEEEETNTGNEMENKEEGDVEMMNTSVPHENKEESMNDQEVKT
EEGNADEKVGDIEDPLKDVKLEPPLDATPVKEEPMETEDKEPETEIKIESEDKETEEGTG
GEEDVKPAAPAVDTTYAAVACSIDGNVKFEDSPQITSGPIPGKIKINITTLPSVIAKESQ
SEGDVEILPTDQSTDNGHGPVLAEATKECGEEAAGGEDGEEPPPPGVEPVQLKPRLVGRN
LTVLPPVVKGSELSGLCSVM
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaattacgtcagacgtggaatgaagtgttcccaccaaagaagttatatgcagta
gacgtacgtgtaaatgcaattgatccagcatggccaatcacagctgtgcctcctaccata
tatgtgaatccgaagttttttcgtcagcaggcaccgccagctcctaattcccagccgtct
tccactgctgtgtctgctacccctccagctacaccagcagttcctcccacagccgtggaa
gatcctcatacaatcaatgaagccaaaatgagggagcagttgcttaagaagcagaaggag
ctgctggaacttcagcagaaaaaattggaattagagttgctgcaaacaaaagcaagatta
gaagaacagcagaaacagttagagagacagactggacatcttcattctgagcagctgaga
ccaccaatgcacattgctgggcaggaagctgctaaactacttgcaccacctaaaccaatg
gaatctccagtggtctcaacgaaatcacaaacggtcgtgcctgtacctgccacagttgtc
aatactagtcagaattctgggacagtaacagtaactgttcctgaagcagctggtgctcct
gcaggacctgctgcaagaggtagtggcagtgcttcaggtagcagcaagatgaagattgag
acgaaatcaacaggagcaacagggctgaagacttcagctacatcatcatcatcaagcacc
agctgccgtccaattccaacaccagcactaactgctgtcacccctggcgtacgatcgagg
gatcctcggcttgcttctcggcaactgcagtctaatgcagttccagaaaatagtatggta
cagccacaagatgaggaaatacaggaacctgatttaatctttgaaccagttaaactagag
actgccaaaccaaaacctcagatcacaatcaatattggttgtgtcaataaaggtactgta
aataaagaaactcgaggaatcagtaagaaagaccctcgtttgataagtaataaggttcat
ggtttaaataatagtaatatcaaaggccggacgtcctctgccactagtagtggagttggt
ggtaagggaagtggcaagatgtttgggagaggtccttctcctttaccttcctccccatcc
caccccagtagtggtggtggtggtagtaagagtttgagttccccttcctcatcatcacaa
cgcaaaacacaaagtaaaggtggcagtaatggtagcacaaagccaccacgtaacaaagct
cttcctagaataataaagattgaccttacagatagtcctccaccaaaagcaggtgataca
aaggaagaaagtagtacaagtaagcagaatactgaaactggtaataaaagtagctctcct
tcctctaaaacagaaagtcacagaaagaaatccttacctcttggtacaagcagatcttct
gagaggaagaaagggtcagggaaatctggcagtgaatcttcaggcatgggtgggaactct
agtaatggtagtattaagcaagaatggagaaagagtcctgtggtaggggagaagagacat
cacgaccatgatcgccctgtatctagtaagtacgacatcttcgttgagccggagggtgat
tctccatcaccaccaccacctccagtcatcagtacagacaacaagcggagaggtgaatct
tctccatcaaagggcagtgtgtttaaagatgtgaagctaccaaaaggtcgcaactatatg
agaagaaacctggctcccaagcctcgcagcgtggaaattcctcctgtgactgccacagga
gatgtggacctgcgcttgggtgcacctccggagaattgtcctcacctagacatgttccag
ccagataccaccacatcagtaccttctgccaaagaggatgtcaaagaaccacttgtagaa
gctgcaaatcaggatgtggatttgcgtcatcttcctgggtcacctagtaggaaacgttca
tccacggaaagaggagagcagccaccaccaaagaaaacaaaagcagaagtatttgatgag
ttgtttggaaatgaagatgttgatcttcgacagttacctcccaatgtaccagttgtcatg
cagactgtacctccatcaccacccccacctccagtaatatctcaatcttcacctgttcca
acatcagcatcgtctcaggatagttcagtgaacactacttcatctttaaagcagccatca
cctgagagagaaagggtggagtctgaagtccgcatggatgaatgcaaatctgttagtgaa
gacgatggtaaagagaattgtgaaagtgaactgaagtctcgaggttgggcaaaatataag
gagaagaaaccagatacatataaatctccattgcggcccatgggtcgttctggtcgtgac
gaacttgatctacaaaaatcacgtagttcaactctagggtccagttcacaactaagagga
agagacatgatatatggaaatcccagggacagaggattgtcaaattttcacagaagtagt
ggaaagtttgataaacttggacaaccacttctttatcacaagttgccagatgatcctgga
gaaaggcgtcggtccctcagcactgcagttgaagaggatacagatatgaggcatcattta
tttgatgatgctagtgatatcaatgttaatatgatcatgcaggaagctgatgaacagcta
aaaaatggcacaatatcgttttctcattataatacagtgctgaaacaggtaattcagtta
aatgaagttcagaagttaagagaagcacaaagacgagatcagcaggaaaataaagagaac
tgggaacggagcagaagaagacgtgcaggggaaaccggtcatttatcgccaatcattgca
gatgatgatagacaaggtagttcctctatagatgccaggtttggagacatcgatgagaga
ttcccagtacttcataagcatagaaatcttacaacctcattgccatcatcttctgagctg
tccatgccaggcaaatttcagcctggaccatcacaatggaatgatgctggacgtcctcac
atgagatctggtcattgggaccatgcacctaatccatggatacgcagtgcacatagtgca
aactcagtacccttaactcaaggtcaccttggcactcatgtccgtatgcttaatccaggc
ccaagtcaaggacaaggcatcccctttcaccaaacttcaggaccagaatttcaaccagtt
gacagttttggtggagttaaccggtggagaccacagtttcagagtcgtacaccttttgaa
ggtgatgtagataggtttgagtcacgttttagtggccgttcggataacagatttcgggga
cctactccatctttgctgcagcagcagcagatacatcagcagcaggcacgtggaaatgat
gaactgccaccagcagatcctatgattctcgagctcatagcacaggatagaatgaggact
attaatatagacggtgtgcctagggaaatacgtttctacggtgacaccgctgtagtgatg
ctagcatgggacgatccacgagaaatcggtttccagggaggtgcacgaacagtcacattt
gatgagagagagtctatactctgttctttgaatgatacatacagagagtttatcattgat
ggatgtactcacaggatacgacttggtgcaccaactcgtgaactatatattgatggcaag
tggtatgaatgtttctttggtggtcctccagttacgattgaaattgatgggaagatgcat
gttgtcaaattggagggtccacctcctcaagttaaaattggcctgatgaagcggacagat
ctggtcgctggcaagatcaatttaatcattaatgccaaaactatggtacctgtgttcttg
gatgccaaaccacaaagatttgacattgagaataaaccccacgtacttcattttgtcgaa
gctttgtcgactgtgttaattaatggacagcctatcaaagttgaatttggtggacttcca
aaacccattattgttcgtggcaagaagcactttatacgtttcaccgtgttaccgcgtggt
atcaggcctggatatgtcagcattgttaatatggaaggtggtcgtttgccatcacctcct
cggccgaagaacgaaaacagtgaaaccgttacctttggtggagatgattctaatgatgca
tccagcagattctcacaaggacatgagcctgtattacctgttgtaggagctactggcagt
ttaggtggacgaggtctgagaaaacagtttggtgcaaacagggaccgagatttacctcat
gagactgaacatgtaacaaactcaccaggacacttccatggagataatgcagtgaaagga
cctgttcctattcaacaacaaaaacatagaccacagagccaattgccactggaaatgttg
atgagcttgatgccaactatgatggcaccagcatcaggttttggttaccaggtggaacag
agctctcaagatggtcagccaggtccccaggaactgcccactcaggttccagactcagta
cctggtgttccagaggcacaattacatggtgctgggctaagcaacatcccattccttcct
gctgaaataaatgtagctgagctatttcagaggctggtggcaacgggaattgttccacag
gccgcaaaatctgatgcagatagcaaaaaggaggaagaagcaaagtctataaaggccgtt
gacttcgggcagcctgaaacattgaaattacgtcagcctggtgtagtggctatcctatac
tctggtattcagtgtagttcctgtggggtacgtttccctccggaacagactatgaagtac
agccaacatttagattggcatttccggcaaaacaggcgtgacaaggacaatactcgcaaa
gctcagagtagaaagtggtattatgatgtctcagattggatccagtttgaagaaattgaa
gacttggaggagagagcacaaagctggtttgaaacccagcaggctgcagaaggtgaagaa
aaagagatacaagaagttcccagtgtttgcgctggagaaaatcctgacgacacattttgt
gctgtatgccatgacaaatttgaacaattttataatgaagaaagagaagagtggcactta
cgttcagcattgagggtagacggaaaaacatatcaccctctttgctatgatgattacaag
ggttcgcttgagatgtcactagaagaacagtatgccaccgaagatactaaagatgaagag
gaggaaactaatacaggcaatgagatggaaaacaaagaagagggtgatgtagaaatgatg
aatacctcagttccacatgagaacaaagaggaatcaatgaatgatcaggaagttaaaact
gaagaaggaaatgctgatgaaaaggtgggtgacattgaagacccgctaaaggacgtaaaa
cttgaacctccattggatgcaactccagtaaaagaggaacccatggaaactgaagataaa
gaacctgaaactgagatcaagattgagtcagaagataaggaaactgaggaaggaactgga
ggggaggaagacgtcaagcctgctgccccagctgttgacacaacatatgcggctgtagca
tgttctattgatggcaatgttaaatttgaagattctccacaaatcacatctggccctatc
cctggtaagattaaaataaacattacaacccttccttctgtgattgccaaggaatcccaa
agcgagggagatgtagaaattttgcccacagatcaaagtactgataatggacatggtcca
gtacttgctgaggccaccaaagaatgtggggaggaagcagcaggtggggaagatggggag
gaacctcctccacctggtgttgaacctgtgcaactgaaacctagattggtgggaagaaac
ctcacagtactgccaccagtggtgaaaggatcagaactgtctggattgtgctccgtaatg
tga
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