Cryptotermes secundus (drywood termite): 111867714
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Entry
111867714 CDS
T07421
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111867714
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csec03019
]
111867714
03041 Spliceosome [BR:
csec03041
]
111867714
Messenger RNA biogenesis [BR:
csec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
111867714
Spliceosome [BR:
csec03041
]
Complex B
Other components
Prp19-related factors
111867714
Complex C
111867714
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_8
TPR_15
TPR_2
TPR_12
PPR
RPN7
Cwf_Cwc_15
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
111867714
NCBI-ProteinID:
XP_033608679
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MMEDFSNEEMPRNQPSVRHWLRYIEHKKGSPEHTVNVIFERALKELPGSYKLWYSYLTLR
RRQIKGRCITDPSYEDVNNAFERSLVFMHKMPRIWLDYCQFLIDQCLITRTRHVFDRALR
ALPITQHHRVWPLYLKFVKMHNIPETAVRVFRRYLKLYPEDAEDYIEYLISIGRLDEAAM
KLAYIVNKEDFVSKHGKSNHQLWNELCELISKNPGKVRSLNVDTIIRGGLRRYPDQVGHL
WNSLADYYVRSGLFEKARDIYEEAIQTVTTVRDFTQVFDAYAQFEELSLSKRMEEAAGNL
NPTEEDDIDLELRLARFEYLMERRLLLLNSVLLRQNPHNVQEWRKRVLLYEGKPHEIINT
YTEAVQTVDPKLAVGKLHTLWVAFAKFYEENRQIDDARVVFENATHVPYNKVDDLASVWC
EWAEMEIRHEYVLLLMSLYLQILMYLVTGHSSQAIINTYTEAVQTVDPKLAVGKLHTLWV
AFAKFYEENRQIDDARVVFENATHVPYNKVDDLASVWCEWAEMEIRHDIMLQAYEKGIAL
FKWPNVYDIWNTYLTKFLKRYGGTKLERARDLFEQCLENCPPKFAKALYLLYAKLEEEHG
MARHAMAVYERATKAVLPEEMFQLFNIYIKKAAEIYGVPKTRQIYEKAIEVLTEENAREM
CLRFAEMETKLGEIDRARAIYTHCSQMCDPRVTAEFWQTWMDFEVRHGNEDTMREMLRIK
RSVQATYNTQVNMMSAQMLSAASNVSGTVADLAPGAKDGMRMLEAKAAQMAHLERPAQQQ
PKGGNILFVRGETQGQDRDGTDTTQVINPDEINIDCDEEDEDEDDDNFPVQKQPIPQEVF
GSLKKPHEDDDDDDDDD
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagatttctcaaatgaagaaatgcctcggaatcagccttctgtgaggcattgg
ctgcgatacattgaacacaagaaggggagtcctgaacacactgttaatgttatctttgaa
agagccctaaaggagttaccaggaagctataaattgtggtacagttatctcacgcttcga
aggagacaaatcaagggacgctgcattacggatccctcatatgaagatgtaaataatgca
tttgagaggtcattggttttcatgcataagatgccaagaatttggcttgactattgtcag
tttctgatagatcagtgccttataacgagaacacgacatgtgtttgatcgtgcgcttcgt
gctctgcccattactcagcatcatcgtgtctggcctctctatctgaaatttgtgaaaatg
cataacattcctgaaacagctgttagagtttttagaaggtatcttaagttatatccggaa
gatgcagaagattatatcgaatatttgatatcaataggacgattggatgaagcagcaatg
aaactagcctacattgtgaacaaagaagattttgtgtcaaagcatggcaagtcaaatcat
cagttgtggaatgaactttgtgagctaatttcaaagaatcctggtaaagtaagatctctg
aatgttgatacaattattcggggaggactcagaagatacccagatcaagtgggtcatcta
tggaactcattggcagattactacgttcgcagtggtctctttgagaaggcccgagacatt
tatgaagaagcaattcaaactgtgaccacagtgagagatttcactcaagtgtttgatgct
tatgcacagtttgaagaattaagtttgagtaagagaatggaggaagcggcaggaaatttg
aatcctacggaagaagacgacattgacctggaattgcgactagctcgatttgagtacctg
atggaacgaaggctcctgcttctgaactcggtcctgctacgacagaacccacataacgtg
caagagtggcgcaagagggtcttactgtatgaaggaaaaccccatgagattatcaacaca
tacacagaagcagttcagactgtagatccaaagcttgcagttgggaaactccacaccctt
tgggtagcatttgcaaaattttatgaagagaacaggcaaattgatgatgctcgtgtggtt
tttgaaaatgccacccatgtcccttacaacaaagttgatgatttggcatctgtctggtgt
gaatgggctgagatggagattcggcatgagtatgttttactgcttatgtccttatattta
caaattctaatgtatctggtcaccggtcacagtagccaagcaattatcaacacatacaca
gaagcagttcagactgtagatccaaagcttgcagttgggaaactccacaccctttgggta
gcatttgcaaaattttatgaagagaacaggcaaattgatgatgctcgtgtggtttttgaa
aatgccacccatgtcccttacaacaaagttgatgatttggcatctgtctggtgtgaatgg
gctgagatggagattcggcatgatattatgttgcaggcatatgagaaaggaatagcattg
tttaaatggccgaatgtttatgatatatggaacacatacctgacaaagttcctgaaacgt
tatggcggaacaaagcttgaaagagcaagagatctctttgagcagtgtctagagaactgt
ccaccaaaatttgcaaaggcactgtacttgctatatgcaaaactggaagaggaacacgga
atggcaagacatgctatggctgtttatgagagagcaacaaaagcagtgttgccagaagag
atgtttcagctgtttaatatttacattaaaaaagctgcagaaatttacggagtccctaag
acacggcagatatatgagaaggcgattgaagttcttacagaggaaaatgcacgggaaatg
tgtttgaggtttgcagagatggagacgaaacttggtgaaattgacagagcccgggccatc
tacacccactgtagtcagatgtgtgatccaagggtgacagcagagttctggcagacatgg
atggacttcgaagtgcgtcatgggaatgaagacacaatgagagagatgttgaggattaaa
cgaagtgtgcaagctacatataacactcaggtgaacatgatgtctgcacaaatgttgtct
gcagccagcaatgtatcaggaactgttgcagatcttgcaccaggagctaaggatggtatg
agaatgctggaagctaaagctgcacaaatggcacatctggagagacctgctcagcagcaa
cctaaaggtggcaacatattgtttgtgcgtggagagacgcagggtcaggacagagatgga
actgacacaactcaagtcatcaatcctgatgagatcaacattgactgtgatgaagaggat
gaagatgaagatgatgataattttccagtacaaaaacagccaattccccaggaagtattt
ggaagtctgaagaaaccacatgaagatgatgatgatgatgatgatgatgattga
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