Cryptotermes secundus (drywood termite): 111867717
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Entry
111867717 CDS
T07421
Name
(RefSeq) collagen alpha-1(II) chain
Organism
csec
Cryptotermes secundus (drywood termite)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRICHOS
Motif
Other DBs
NCBI-GeneID:
111867717
NCBI-ProteinID:
XP_023713561
LinkDB
All DBs
Position
Unknown
AA seq
1335 aa
AA seq
DB search
MAKSHLARVAVVLLCWEFLATARVTKHVVLQYKHPAEVNLDETRDLTMATPPDTVRFVKY
TTLHDYDMKMIAYKDLEKSQCYLERMKDSESGLKHTLTKIQSQSQSSKMQDETRTMYVPD
NSLSKYEVWRLAGPRISGFCRGFLTFVLQELRPHFPSGTRNNALPDEPALWLSHLQYGDA
LLQRVKGRAKRQTTYTTRGYGRRHRGQTQTQYLAFQNGGNAGKAEAESSPDLSRTHVSGT
NGMGQAQSQTGEGNGCEGCFPGVRPFGTPQVVVPGAVVPAIGVPGVGLPAVGIPGEGAPQ
VPGIGALGVGPPEVRVPGVGVPGVQVPGVGAPGVLGIAAPGVGVPGVGAPGVGVPGVGAP
GVRIPGVGIPGLGVPGPPVTGIYHPGVTGVGVPGVPGVGIPGAIPSVGVPGVLGVGIPGV
IPSVGVPGVAPGVGIPGGVPAGVPGVAPGIGVPGGVPGVALGVHVPGGVPGVGVPGVGAP
EVTPEFGVPGGVPGVGVPGVAPGIGVPGGVPGVSVPGVAPGIRIPGVAPGIGVPGGVPGF
GVPGGVPGVSVPGVAPGVGVPGGVPGVGIPGVAPEVGVPGVAPVFGVPGGVPGVGVSIPG
VPPGVGVPGAVPGAGVPWGIPGFGVPGGVPAVGVPAAIPGTGLPWGFPGRIPGAGVPPGV
PGVGVPGGIPSVGIPGVGVPGGVPSVGVPGIVPGVAPPGAIPYQPGIYQPPGTGIQVGYP
GGIVTQPQYVQPGRVNGVYTGQEVYYAAAGDSQVESTVRQEDKETRAASSAQAKYGEGTA
QTQVSGIYSGTGAFSAQAQTSDKGRGAQSQVVGGKEGATSTAQGQAGSGKTQSQVQLGSS
SGATAAEAQSGGLYYGTNTQVQAGHQGGMADAQAKGQGSTSSQAQIGFTPYQKNDRTSGL
NFPFHGGGSASAQSGAYSGQSQSQIQGSFLHGISYTGAAQAGSGQTNYSRTANSNYENFG
GKLGLVQSGSRDSISQNGLSTSHAQQPGYQPFASSNNNAPSSHTIAQQQTHERERSGQED
AALPHHSDKLSRYDDEAIRQPHSFTGTETASQHGESSNLGVTRNGNGRVQGGYRIQTHVN
RNDTGHIGAPTQTQHIVLGPLNGHGAHIVQDSDDQDQYSPGDILQPGQTIHGTPEYTIPK
GYRGRITSVAGPQKTSAQGGQSQTVVITPGLGNVTYTNLSAGRYQPPVMSIPVGQQAADG
GYEQKSQSGHVGSEDTQLRNGGQPSFPVRRNGSQFNQRSGRTSRNGNHIRNGHSLNTYHQ
PTPDSFVTVTKSVTGQLDNGKANNSTGKYTHTYYTKSSTCGYFTFSCNIVFGSNGRTKIC
KPNPQTKPDGTPCCC
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atggccaagtcgcacctcgccagggtggctgtcgtgctcctctgctgggaattcctcgcc
accgctcgtgttaccaagcatgtagtgctccagtacaagcacccagctgaggtgaacttg
gacgaaacacgggacctgaccatggccacgccaccagatactgtcagatttgtgaagtac
acaactttacatgattacgacatgaaaatgatagcctacaaggacctggagaagtcgcag
tgttacctggaacgaatgaaggactccgaaagtggcctcaagcataccttgacaaaaatt
cagtcacaaagtcagtcttcgaagatgcaagacgaaacaaggacgatgtatgtcccggac
aacagcttgtccaaatatgaggtgtggagactagcggggcccagaatctccgggttctgc
cgtggattcctcacattcgtccttcaagaactgcggcctcacttcccaagtggtactagg
aacaacgcgttacccgatgagccggctctctggctgtcacaccttcaatatggagatgct
ttattgcaacgggtcaaaggccgcgcaaagcgccaaacgacttacactacgaggggatat
ggacgccggcatagagggcagacacagacacagtacctcgccttccaaaatggtgggaac
gcaggcaaagcagaggcagagtcttcgccagatctttcaagaactcacgttagtggtaca
aatggaatgggtcaagctcagagtcagactggagagggaaatgggtgtgaaggttgcttc
cctggagtaagaccatttggaacaccacaagtggtagtacctggtgcagtggtaccggca
ataggagtaccaggtgtcggattacctgcagtaggtataccaggtgaaggagctccacag
gtaccaggcataggagcactgggtgtgggacctcctgaggtacgagtaccaggtgtggga
gtgccgggggtacaagtacctggtgtcggagcaccaggagttctaggcatagcagcacct
ggggtaggagtaccaggcgtgggagcgccaggagtaggagtaccaggtgtgggagcgcca
ggagttcgaataccgggtgtgggaataccaggattaggggtgccaggacctccagttact
ggaatttatcacccaggagttacaggtgtcggtgtaccaggggttccaggtgtaggaata
ccaggagcgattccaagtgttggtgtaccaggggttctaggtgtaggaataccaggagtg
attccaagtgtcggtgtaccaggagtagctccaggggttggaataccaggaggggttcca
gctggtgtaccaggagtagctccagggattggtgtaccaggaggggttccaggagtagct
ctaggggttcatgtaccaggaggggttccaggggttggtgtcccaggtgttggtgctcca
gaagtaactccagagtttggtgtacctggaggggttccaggtgttggtgtcccaggagta
gctccagggattggtgttccaggaggggttcctggtgttagtgtaccaggcgtagctcca
gggattcgtataccaggagtagctccagggattggtgtaccaggaggggttccagggttt
ggtgtaccaggaggggttcctggtgttagtgtaccaggtgtagctccaggggttggtgta
ccaggaggggttccaggtgttggcataccaggagtagctccagaggttggtgtaccagga
gtagctccagtgtttggtgtaccaggaggggttccaggagttggtgttagtataccaggt
gtgcctccaggggttggtgtaccaggagcggttccaggggctggtgtaccttgggggatt
ccaggttttggtgtacctggtggagttccagctgttggtgtaccggctgcaattccagga
actggtctaccatgggggtttccaggaagaattccaggtgctggtgtacctccaggtgtt
ccaggtgttggagtaccaggagggattccaagtgttggtatacctggtgttggtgtacca
ggaggagttccaagtgttggagtgccaggaatcgttccaggtgttgcaccaccaggagca
attccatatcaaccagggatttaccagccacctggtacaggaatacaagtcggttatcca
ggtggaatagtaacacaaccacagtatgtacaacctggacgtgtaaatggtgtgtacaca
ggccaggaagtatactacgcagctgctggagactctcaggttgaaagtactgtgagacaa
gaagacaaggaaactcgtgctgcttcttccgcacaagcgaagtatggagaaggtactgct
caaacacaagtgagtggcatatactctgggactggagccttctcagcacaagcacagact
agtgataaaggccgtggtgcacagagtcaagtggttggcggtaaagaaggagcaacaagt
acagcacagggacaggctggaagtggcaagactcaatcacaggttcaactgggatcatct
agtggagccacagcagctgaagcacaaagtggtggcctatattatggaacaaatactcaa
gtccaggcaggtcaccaaggaggaatggctgatgcacaagcaaaaggccaagggagcaca
tccagtcaagcccaaattggatttacaccttatcagaaaaatgacagaacaagtggattg
aacttccctttccatggtggtggatcagcttcagctcagagtggagcatattcaggacag
tcacaaagccagattcaaggttcatttctacatggtatctcctatacaggtgcagcgcaa
gctggctcagggcagacaaactatagtcgaacggccaatagtaattatgagaactttgga
ggtaaactaggattggttcagtcaggaagtagggacagtatatctcaaaatggactatct
acatcacatgcccagcaaccaggatatcaaccatttgcttcatcaaacaacaatgcacct
tcatcacacacaattgctcagcagcaaactcatgaacgtgagagaagtgggcaagaagac
gcagctttaccacatcatagcgacaaattaagccggtatgatgatgaagcaatcagacag
cctcattctttcacaggcacagaaacggcctctcaacatggagagtccagcaatttagga
gtcacaaggaatggaaatggtagagtacaaggaggatacagaattcagacacatgtgaac
agaaatgacacaggacacataggtgcaccaacacaaactcaacatattgttctcggtcca
ctgaatgggcatggtgcacatattgttcaggactcagacgatcaagatcaatatagtcct
ggagatattttgcaaccaggccaaaccatacatggcactccagaatataccataccaaag
ggatacagaggccgcataacatcagttgcaggtcctcagaagacatctgctcaaggaggt
cagtcacaaactgttgttataacacctgggcttggtaatgtaacatacactaatctttct
gcaggaaggtaccaaccaccagttatgagtatccccgtaggccagcaggctgctgatggg
ggttatgaacaaaagagtcaatcaggccatgtcggcagtgaagacacacaattacgaaat
ggtggtcaaccatcatttcctgtaagacgaaatgggagccaattcaaccaaaggagtggc
aggacatcaagaaatggaaaccacattaggaatggacactctttgaacacctaccaccaa
cccacacctgacagttttgtcacagttaccaaaagtgtaacaggacaacttgacaatggg
aaggcaaacaacagtacagggaaatacactcacacttactacaccaagtcctcaacatgt
ggttactttacattctcctgcaatattgtctttggttcaaatggtagaaccaaaatttgc
aagccaaatccccaaaccaaacctgatggtacaccatgctgctgttag
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