Cryptotermes secundus (drywood termite): 111868426
Help
Entry
111868426 CDS
T07421
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec04382
Cornified envelope formation
csec04512
ECM-receptor interaction
csec04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111868426
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111868426
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111868426
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csec04147
]
111868426
00536 Glycosaminoglycan binding proteins [BR:
csec00536
]
111868426
Exosome [BR:
csec04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111868426
Glycosaminoglycan binding proteins [BR:
csec00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111868426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111868426
NCBI-ProteinID:
XP_023714804
LinkDB
All DBs
Position
Unknown
AA seq
1780 aa
AA seq
DB search
MWGLRRASVPWMLVLALGLLFCVHSGHSAACKGCIGTYKCDCTGIKGLPGELGIFGLRGS
EGLPGDIGLEGPLGPKGEKGAAGEDGGPGDKGYRGEAGVPGFRGTPGIPGAVGDEGTRGP
HGLDGCNGTDGSPGQHGQPGIPGVRGLPGAFGPPGIPGDPGEGGVNTKGVKGDRGVPGRP
GIEGLPGYRGQPGIPGYAGPPGFQGFQGLPGPQGLRGDPGEVKYGLPGMPGDQGDLGDPG
PPGKLVHDGEEAVEHPPIFLWKGPKGPKGATGDSGSRGLKGELGPKGPQGQPGLIGAKGM
KGDQGPDGQRGKQGKEGPAGPSGPKGAKGAPGYSGQTGEDGPKGPPGTPGAIGPPGVQGV
DGEPGIYNPNLDEEGGPGVIGHQGPLGPPGDRGLSGIPGRPGNMGFIGPPGEPGDAGAPG
QQGPKGLSIKGERGNDGLSGPQGPQGSPGLPGQPGALGEKGFPGLTMTGPPGEDGIPGRD
GFSGPIGDRGENGLQGPKGFLGIGVPIPGPPGEAGLPGSPGAPGLPGLPGMPGSKGEHGP
KGDDCGVCLPGLRGPKGEPGDSARNGVPGISGFPGLQGPRGLKGQKGKPGPHGRPGLDGV
NGTAGIMGAPGPKGQTGELIYPPLSMLLADKGSIGDRGFRGIQGPIGPPGPPGLPGQEGL
RGWKGEKGQHGPDGVPGRNGRPGADGYPGQKGEDVLIPKEFLRGDAGLDGYRGEPGEPGD
LGGQGEPGDAGHFIMEIKGIKGFKGPTGDRGRDGNKGSSGITGNMGLPGLPGPKGQPGIS
IAGPEGLKGYSGMPGDQGLRGPPGIPGMDGLPGPPGPPSQKGSRGDIGLAILNGEMGIKG
AKGLKGEPGSEGPQGLPGRHGPVGEKGNVGPKGAPGLTGLNGLPGQKGLPGDTVPGAPGA
PGLPGLPGLVGIFGAPGPRGQDGPGGVAGLKGLKGEIGQVGRRGIDGEQGPQGFPGIGGR
MGIPGLPGPTGDQGSVGLPGPPGLPGRPGLPGPLGAKGGRGDFGPQGNPGFRGRPGFQGP
RGDPGLPGIEGPPGDSSFSGPKGEQGEPGLRGEPGIDGLPGLDGLQGEPGEPGRIINGIR
GEPGQKGERGFNGSRGLPGLSGQPGDIGFEGPKGITGERGVPGYTGFKGRDGLPGFKGLP
GNPGLSGPPGLKGERGNEGEPGIFGRPGLPGDAGPIGLQGLQGLPGPKGLIGEPGYKQFA
PGSKGEPGVPGLHGLKGYQGIPGETGVPGLPGKVGSPGEIGTPGLRGFPGISGSPGYPGE
SGPAGPPGLPGLGAEPGEKGRSGFNGHPGKPGRPGQKGAPGVYGPDGPIGIPGRPGGIIQ
GPKGISGSPGLPGLPGRLGPPGLPGQEGQPGVPGPKGIHGSPGLPALSFKGMAGTPGLPG
LEGIPGPKGIQGDSGLKGLPGYAGRKGERGLPGINGPSGLPGIPGPKGEKGARGDSFPPS
QSVRGAPGDAGPPGAPGFNGGQGQMGKPGRDGLQGLKGDDGIPGRPGLPGLPGPKGQPGF
AGRPGLTGNRGLPGFPGSRGDPSPPGPPPKSRGFFFTRHSQTIQTPVCPRGTVRLWDGFS
LLHFLGNAKAHGQDLGAPGSCLQRFSTMPFMFCNINNVCDYSSRNDYSYWLSTDYPMPAM
MTPIAARDLRQYISRCSVCEAPTRVITVHSQSIQLPECPDGWDPLWRGFSFLMHTDAGAE
GSGQSLVSPGSCLENFRATPFIECHGMGRCNYFTTAYSYWLATIEDRDMFRRPRQQTLKA
GSLETRISRCTVCIRQRRESRLNIADTGENIRPVYIPPGN
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atgtggggactgcggcgggcttcggtgccttggatgctggtcctggcgctcggtcttctg
ttctgtgttcacagcggacactcggcggcttgcaagggatgcattggaacttacaaatgc
gactgcactggcatcaagggactccctggggaactggggatcttcgggttgagaggtagt
gagggtctgcctggagatattggactggagggaccacttggaccaaaaggggagaaggga
gccgcaggagaagatggcggtcctggagacaagggctaccggggagaagctggcgtccca
ggattcaggggtactccaggaataccgggagcagttggggatgaagggacccgaggacca
catggacttgacggctgtaacggcacagatggcagcccaggacaacatggtcagcctgga
atacccggagtgagaggtcttccaggagcatttggcccccctgggataccaggagatccg
ggagagggtggtgttaataccaaaggtgtgaaaggagaccggggagtcccaggaagaccg
ggaatagagggactacctggctataggggtcaaccagggataccagggtatgcaggtcca
cctggatttcaaggattccaagggttaccaggaccacagggtctgcgtggagatccagga
gaggtcaagtatggattacctggaatgccaggagaccagggagatttaggggatcctggc
ccgcctggcaaacttgttcatgacggggaagaagcagtagaacaccctcctatattctta
tggaaagggccaaaaggtccgaaaggtgccactggagattctgggtcacgaggactgaag
ggtgaacttggaccaaaaggaccacaaggtcagcctggtttaattggagccaaaggaatg
aagggtgatcaaggtccagatggacagagaggaaaacagggtaaagaaggacctgcagga
ccaagtggtcccaaaggggcaaagggagccccaggttattctggacagacaggggaagat
ggaccaaagggaccaccagggacaccaggtgcaataggcccaccaggagtacaaggagtt
gatggagaacctgggatttacaatcccaatcttgatgaagaggggggtcccggtgttata
ggacatcaaggccccttaggacctcctggagatcgaggactctctggaatacctggtcga
cctggaaacatgggatttattggtcctccaggtgaaccaggggatgctggagcaccggga
caacaagggccaaagggtctcagtatcaaaggagaaagaggaaatgatggtctatcaggc
cctcagggtcctcagggaagtccaggtttacctggacaaccaggtgctctaggagagaag
ggcttccctggactcacaatgacagggcctccaggtgaagatggaataccaggacgtgat
ggtttcagtggcccaattggagatcgtggtgaaaatggtttacaaggaccaaaggggttt
ctaggtataggtgtccctattccgggcccccctggggaggcaggacttccaggatcacca
ggtgcacctgggttgcctggtcttccaggaatgcccgggtcaaaaggtgaacatggaccc
aagggtgatgactgtggagtgtgtttaccaggtcttcgtgggccaaaaggagaacctggt
gattctgcaagaaatggtgtaccaggcatttcaggtttccctggacttcaaggtccacgt
ggactcaaaggccagaagggtaaacctggtccacatggaagaccaggtttagatggagtg
aatggaactgcaggtattatgggtgcaccaggtccaaaagggcagacaggcgaattaata
tatccacccttgagcatgttattggcagacaaaggatcaataggtgacagaggatttcgt
ggaattcaaggaccaattggtccccctggacccccaggccttccaggtcaagaaggactt
cgaggttggaaaggagaaaagggtcaacatggcccagatggagttcccggaagaaatgga
cgaccaggtgcagatggctatcctggccagaaaggtgaagatgtcctgatcccgaaggag
ttcctcagaggagatgcaggacttgatggttaccggggtgaaccaggggagcctggtgat
cttggaggtcagggggaacctggagatgcaggtcactttattatggaaatcaagggaata
aaaggtttcaagggacctacaggagatcgaggacgtgatggtaacaaaggaagctcaggt
attacaggaaacatgggtctgccaggcctcccaggtcctaaaggacaacctggcatatcc
attgcaggtcctgagggacttaaaggatattctgggatgccaggagatcaaggactccga
ggaccaccaggaatacctggcatggatggcctacctggtcctcctggaccacctagtcag
aagggtagtcgtggagatataggacttgccatcttgaatggtgaaatgggtattaagggt
gctaaaggcctgaaaggggaacctggtagtgaaggacctcaaggattgccaggaagacat
ggacctgttggagaaaaaggaaatgtaggaccaaagggtgcaccaggactaacaggactg
aatggtttacctggtcagaaaggtctaccaggtgataccgttcccggagccccaggtgca
cctggcctgcctggtttacctggtttggttggcatatttggagcaccaggccctagagga
caggatgggcctggtggtgtagcaggattgaaaggcttgaaaggagagattggacaggtg
ggccggaggggaattgatggagaacaaggaccacaaggatttcctggaataggtggacgt
atgggcattcctggattgcctggccccactggtgatcaggggtcagttggactcccaggc
cctcctggtctaccaggaagacctggattaccaggacctcttggtgctaagggtggcagg
ggtgattttggaccgcagggaaatcctggctttagaggacgacctggatttcagggtcca
cgtggtgaccccggacttccaggaattgaagggcccccaggagattcatcattcagtggt
cccaagggagaacaaggtgaaccaggtttgagaggggaaccaggaattgatggtctgcct
ggtctggatggtctccagggagagcctggagaaccaggaaggattattaatggtattcgt
ggagaacctgggcaaaagggtgaacgtgggttcaatgggagccgtggtcttccaggactg
tctggacaacctggtgatataggctttgagggaccaaaaggaataactggtgagagaggt
gtaccaggatatactggttttaagggtagggatggactaccagggttcaagggcctgcct
ggaaacccaggtctctcgggtccacctggactcaaaggggagagaggcaatgaaggagaa
cctggaatatttggcagaccaggtctgcctggtgatgctggacctataggactgcaaggt
ttgcaagggttaccaggacccaagggtctgattggagaacctgggtacaagcagtttgca
cctggctccaaaggtgaacctggagtaccaggtctgcatggactaaagggctaccaaggc
ataccgggtgagactggtgtacctggactgcctggaaaagtgggttcccctggtgagatt
ggtaccccaggacttcgtggatttccaggaattagtggaagcccaggttacccaggagaa
tctggtcctgctggtcctccaggattaccaggtttgggtgcagaaccaggtgaaaaggga
agatctggttttaatggacacccaggaaaaccaggaagaccaggccaaaagggagctcct
ggggtctatggacctgatgggccaattggaataccaggacgaccaggtggtataatccaa
ggtcctaaaggaatatcaggttctccaggattgcctgggctgccaggaagattgggacct
ccagggctaccagggcaggaaggacagcctggagttccaggtcccaaaggcatccatggc
tcaccaggactcccagcactaagttttaagggcatggctggtactcctggccttcctggg
ttggaaggaatcccaggaccaaaaggaattcaaggagattcaggcctcaaaggacttcca
ggatatgcaggcaggaaaggagagagaggtttacctggtattaatgggcccagtgggctg
ccaggaatacctggtcccaagggagagaaaggtgcacgtggtgactcgtttcctccaagc
caaagtgtgcgtggtgcccctggtgatgcaggacccccaggtgctccaggatttaatggt
ggccagggacaaatgggtaaaccagggcgtgatggacttcaaggtctcaagggagatgat
ggaataccaggacgtccaggtctaccaggactgccaggtccaaagggtcaaccagggttt
gcaggcaggcctgggttgacagggaacagagggcttccaggtttccctggttctagaggt
gacccatctccaccaggaccccctcccaagagccggggctttttctttacacgacattcg
cagactatccagacaccagtctgtcccagaggcacagtaagactgtgggatggtttctct
ttgctacatttcctggggaatgctaaggcacatggccaagatttgggggcacctggaagc
tgtttacagagattctccacgatgcctttcatgttctgtaatatcaacaatgtttgcgac
tactcaagcagaaatgactatagttattggttgagtactgattaccccatgcctgcaatg
atgacaccaattgcagcaagagacctgaggcaatatatatcaaggtgctctgtgtgtgaa
gcacccactcgagtaattacagtgcacagtcagtcaatacaattgcccgaatgtcctgat
ggctgggacccactctggagaggtttcagtttcttaatgcacacagatgcaggagctgag
ggtagtggtcagtctcttgtttctcctggttcctgccttgagaatttccgagccacacct
ttcatagagtgccatggcatggggcgctgtaactactttacaacagcttattcctattgg
ttagctaccatagaagatcgggatatgttccgaagaccacgtcaacaaacacttaaagct
ggaagtcttgaaacaaggataagtcgctgcacagtttgcatcagacaaagacgagaaagc
cgtctaaatattgctgacacaggtgaaaacatacgaccagtttacatcccaccaggaaac
taa
DBGET
integrated database retrieval system