Cryptotermes secundus (drywood termite): 111868755
Help
Entry
111868755 CDS
T07421
Name
(RefSeq) uncharacterized protein LOC111868755 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111868755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csec03019
]
111868755
Messenger RNA biogenesis [BR:
csec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111868755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WDR55
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
eIF2A
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_WDR11_2nd
MIOS_WD40
TFIIA
WDR54
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
111868755
NCBI-ProteinID:
XP_023715462
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MMQTVQFSQPPPPIPNMSVPPPAMVPHHYSQHRFHGERGAHRGHFFQPFRPYPRQGPGGP
DSEFDGKRLRKSVMRKTVDYNSAVIKMLECRIWQRDFRDRRSLQPDVTYYPDLQPPPSYI
DNAINSVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASSGEFTLWNGLTFNFETILQA
HDSPVRTMVWSHNDVWMVTGDHAGYVKYWQSNMNNVKMFQAHKEAIRGLSFSPTDHKFVT
CSDDGTLRIWDFMRCYEERILRGHGADVKCVHWHPQKGLIISGSKDNQQPVKLWDPKTGQ
SLATLHAHKSTVMDIKWNSNGNWLVTASRDHLLKLFDLRNLSQEVQTFRGHKKEASSVAW
HPYHEGLFCSGGSDGAILFWHVGADKEVGGIEQAHDSIVWTLAWHPLGHILCSGSNDHTS
KFWTRNRPGDLMRDKYNLNTLPAGLPGFDDQDMDEPAVIPGMGPEDKVEAVASPTVAQIP
GLDFDATEDRHRSYHKKVPYSKPIPRNFQAQWNETGRANHDDGRDEESDEEDSSWRGRKS
LITPKDPITEVITHLIETNPPPGVVPLRQLQPQAIIVYGKLLPVEGNPGLASAIAAGPVA
LQRYIDSGEVEELADVIPHVDDNDDFDEYDDCDDNMDLETMSDIELPAPLPSSAFARKAA
QQQQQQQQQQQQQQQQHHPTHQRKSRFSDREDTKADLEPKSSSNNRDTPSIRNAPVGGRS
EDKDMRSLPLEQPRPLSFPALRPSPGSQLGRTPDQDMRFTGSSVGDLDLRQTPGGALVSG
PLGGTGDQDFRRLQMDSDLRHLHNPLLPRPLMDEDMRNHQGFDQDMRAEGGGDLDLRGNP
GMLPQLPSSQLMTGPFDSDFRRQNSSIGPLLPRPNQGSPLCDGMRGGPSESLHEPYDEKE
DVSSGSRGPVETEGPSRRGFMMGRPQFGNHPPRSLLEQEWGSGPRKGGWAESALDEEDGP
GGNFRHGGSFRGDDKFRGGYPMSPGEAGNSPSNGQNFGTEPEDSPAGSYNRGNRGPTSWG
GGGGSYPPSRQGSPFRHQLEGGFRGRGGRGGFSNRGRGGGMSRGGSRGRYGGSRGVRGGR
GPKRGQF
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagacagtacagtttagtcagccaccccctccaattcccaatatgtcagttcca
cccccagcgatggtaccccatcattattcccaacatcggttccatggagaaagaggtgcc
cacagaggtcacttctttcagcccttccgtccttatcctcggcaaggccctggtggacct
gacagcgaatttgatgggaagagacttcgcaaatctgttatgcgaaagactgttgattac
aactctgcagtaataaagatgttggagtgtcgtatatggcagagggattttcgggaccga
cgctcattgcagccagatgtgacgtattatccagacctccaaccaccacctagttatatt
gacaatgccataaattctgtaacaacacgttttgtgaagactgctaccaataaaatgcgc
tgtcccatattttgcatggcttggactcctgaaggccgccgcctggttacaggtgcatct
agcggagaatttacactttggaatgggcttactttcaactttgagaccatcttgcaggcc
catgacagcccagtaagaactatggtgtggtcccataatgatgtgtggatggttacagga
gatcatgccggctacgtgaagtactggcagagtaatatgaataatgtgaagatgttccag
gcacataaggaggcaatccgaggtctcagcttcagcccaacggaccataagtttgtgact
tgctcagatgatgggacattgaggatctgggacttcatgcgatgctatgaggagcggata
ctcagaggacatggtgctgatgtgaaatgtgtacactggcatccccagaaaggtcttatc
atctctggcagcaaagataatcagcaaccagtgaaactgtgggacccaaagacaggccaa
tcactggcaacactccatgcccacaagagcactgtgatggatatcaaatggaattccaat
ggcaattggttagtgactgcttctcgagatcatctccttaagttattcgatctgcgcaac
ttgtcacaagaggttcaaacatttcgtggtcacaaaaaagaagcaagtagtgttgcatgg
catccttaccatgagggtcttttctgcagtggaggttcagatggtgccattctcttttgg
catgttggggcagacaaagaagtgggtggcattgaacaagcacatgacagcattgtgtgg
acattagcttggcatccacttggacatatcctatgctcaggatccaatgatcatacaagt
aaattctggactcgtaaccgacctggtgatcttatgcgtgacaaatacaacctgaatact
ctgccagcagggctgccaggttttgatgaccaggatatggatgaaccagctgtaatacct
ggtatgggtcctgaagacaaggtggaggctgtagcaagccctacagttgctcagatccca
ggactagactttgatgctactgaggatagacaccgttcatatcacaaaaaggttccatat
tcaaaaccaattccaaggaatttccaggctcagtggaatgagacagggagagcaaatcat
gatgatggtcgagatgaagaaagtgatgaagaagatagttcgtggaggggtcgtaaatct
ttaattacaccaaaggatccaataactgaggttattacacacctaatagaaacaaatcca
cccccgggagttgtgcctcttagacagctgcagccacaggctattattgtttatggaaag
ctcctcccagttgaagggaatccaggtttggcaagtgcaattgctgcaggaccagtggca
ttacaacgttatattgactcaggtgaagtggaagaattggctgatgtaattccacatgta
gatgataatgatgattttgatgaatatgatgattgtgatgataacatggatttggagact
atgtcagatattgagctccctgcacctcttccctcatcagcctttgctcgcaaagctgct
cagcaacaacagcagcaacaacagcaacaacagcaacaacagcagcagcatcatcctact
catcaaaggaagtcacgattcagtgatcgtgaggatacaaaagctgatttagaaccaaag
tcttccagtaacaatcgtgacactcctagcatcagaaatgcaccagtgggtggtaggtca
gaagacaaagacatgcgcagtttacctcttgagcagccacggcctttaagtttccctgca
ctccgtcctagccctggatcacagcttggtcgcacccctgatcaggacatgaggtttaca
ggatcttcagtgggggacttggatctacgtcagacccctggaggtgctctagtgtcaggg
ccattgggaggaacaggtgatcaggatttccggagactgcagatggacagcgatttgaga
caccttcataacccattgctcccaagacccttaatggatgaggacatgcgtaaccatcaa
ggatttgaccaggacatgcgagcagaaggtggaggagatttagacttgcgtggcaatcca
ggcatgttaccacagcttccttcttctcagcttatgactggaccatttgactctgacttc
cgtcgccagaacagtagcattgggccattgctacctcgacctaatcaggggtcccctctc
tgtgatggaatgagaggtggcccttcagaaagcctacatgagccatatgatgagaaagaa
gatgtgagttctgggagcagaggtccagtggagactgaagggccaagcaggagaggattc
atgatgggaagaccacagtttggtaaccatcctcctagaagcttattggaacaagagtgg
ggatcaggacccagaaaaggaggctgggctgaatctgcactagatgaagaagatggtcca
ggtggaaactttaggcatggaggaagttttcgtggtgatgacaaattcagaggaggttac
cctatgagtcctggggaagcagggaatagcccaagtaacgggcagaattttggaaccgaa
ccagaggacagtccagctggaagttataatagaggaaacagaggtccaacttcttggggg
ggaggaggaggatcttatcctccatctagacaaggcagccccttccgtcaccagctggaa
ggtgggttccgtggtcgtggaggcagaggtgggttctctaacaggggaagaggaggtgga
atgtcaagaggtggctcgagaggcagatatggaggttctagaggagtacgtggtggacgt
ggtcccaaacggggacagttttga
DBGET
integrated database retrieval system
