Cryptotermes secundus (drywood termite): 111871562
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Entry
111871562 CDS
T07421
Name
(RefSeq) uncharacterized protein LOC111871562
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111871562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csec03021
]
111871562
03019 Messenger RNA biogenesis [BR:
csec03019
]
111871562
Transcription machinery [BR:
csec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111871562
Messenger RNA biogenesis [BR:
csec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
111871562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
111871562
NCBI-ProteinID:
XP_023720532
LinkDB
All DBs
Position
Unknown
AA seq
830 aa
AA seq
DB search
MCNDEIKQKSEECGSSIDARFGDIDERLPVHHKRRNLTPSLPLSSELSMPGRFQPGPSQW
NDAGRPHMRSGHWDYASNPWIGSAHSANSAPLTQGYLGTRVRMLNPGPSQGHGIPFHQTS
GPEFQPVDSFGGVKRKRPQFQSRTPFEGDIGRLESPFNGRSDKRFRRPAPSLLQQQQQAH
GNDELPPADPMILKLIAQDRMRTINIGGVPREIRFYGDTAVVMLAWDDPREIGFQGGART
VTFDERESILCSLNDTYREFIIDGSMHRIRLGAPTRELYVDGKWYECFFGGPPVTIEIDG
KMHVVRLEGPPPQVKIGLLKRTDLVAGKINLIIDAQTMVPVFLDAKPQRFDIENEPHVLH
FVEALSTVLINGQPIEVEFGGLPKPIIVHGKKHFICFTVLPRGIRPGYVSIVNMEGGHLP
SHPRPKTENSKTLTFGREDSLDASSRFSQGYEPVLPVVGATGSLGRRGLRKQFGANRGRD
LPHETKHATNSAGHFHRDNAVKGPVPIQQQKHRPRVPEAQLHGAGLSNIPFPPAEINATE
LFQRLVAAGIIPQAAKSDADSKKEEEAKSIKTVDFGQPETLKLRRPGAVAVLYSGIQCSS
CGIRFPPEQIMKYRQHLDWHFRQNRRNKDNTRKARSREWYYHASDWIRFEEIEDTEERAK
SWFETQQAAEGEEKEIQEVPSVCAGENPEDAFCAVCHDKFEQFFHDDEEEWHLRSALRVD
GKTYHPLCYDDYKRSLERSLEEQYATEDTEDENNTGNEMDNKEEGEVKMMDNSVPHENKE
ESMNGQEFKTEEGNADEKVGDIEDLQQQQQQVGKTGSCRNLLHLVLNLCN
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaatgatgaaataaagcaaaagtctgaagaatgtggttcctctatagatgccagg
tttggagacatcgatgagagattgccagtacatcataagcgtagaaatcttacaccttca
ttgccattgtcttctgagctctccatgccaggcagatttcagcctggaccatcacaatgg
aatgatgctggacgtcctcacatgaggtctggtcattgggactatgcctctaatccatgg
ataggcagtgcacatagtgcaaactcagcacccttaactcaaggttaccttggcactcgt
gttcgtatgcttaatccaggcccaagtcaaggacacggcatcccctttcaccaaacttca
gggccagaatttcaaccagttgacagttttggtggagttaaacggaagagaccacagttt
cagagtcgtacaccttttgaaggtgatatagggaggctcgagtcaccttttaatggccgt
tcggataagagatttcggagacctgctccgtctttgctgcagcagcagcagcaggcacat
ggaaatgatgaacttccaccagcagatcctatgattctcaagctcatagcacaggataga
atgaggactattaatataggtggtgtgcctagggaaatacgtttctacggtgacaccgct
gtagtgatgctagcgtgggatgatccacgagaaattggtttccagggaggtgcacgaaca
gtcacatttgatgagagagagtctatactctgttctttgaatgatacatacagagagttt
atcattgatggaagtatgcacaggatacgacttggtgcaccaactcgtgaactctatgtt
gatggcaagtggtatgaatgtttctttggtggtcctccagttacgattgaaattgatggg
aagatgcatgttgtcaggttggagggtccacctcctcaagttaaaattggcctgttgaag
cggacagatctggttgctggcaagatcaatttaatcattgatgcccaaactatggtacca
gtgttcttggatgccaaaccacaaagatttgacattgagaatgaaccccacgtacttcat
tttgtcgaagctttgtcgactgtgttaattaatggacagcctatcgaagttgaatttggt
ggacttccaaaacccattattgttcatggcaagaagcactttatatgtttcaccgtgtta
ccgcgtggtatcaggcctggatatgtcagcattgttaatatggaaggtggtcacttgcca
tcacatcctcggccgaagactgaaaacagtaaaacgttaacctttggtagagaagattct
cttgatgcatccagcagattctcacaaggatatgagcctgtattacctgttgtgggagct
actggcagtttaggcagacgaggtctgagaaaacagtttggtgcaaacaggggccgagat
ttacctcatgagactaaacatgcaacaaactcagcaggacacttccatagagataatgca
gtgaaaggacctgttcctattcaacaacaaaaacatagaccacgtgttccagaggcacag
ttacatggtgctgggctaagcaacatcccattccctcctgctgaaattaatgcaactgag
ctatttcagaggctggtggcagcgggaattattccacaggccgcaaaatctgatgcagat
agtaaaaaggaggaagaagcaaagtctataaagaccgttgacttcgggcagcctgaaaca
ttgaaattacgtcgtcccggtgcagtggctgtcctgtactctggtattcagtgtagttcc
tgtgggatacgtttccctccggaacagattatgaagtaccgccaacatttagattggcat
ttccggcaaaacaggcgtaacaaggacaatactcgcaaagctcggagtagagagtggtat
tatcatgcctcagattggatccggtttgaagaaattgaagacactgaggaaagagcaaaa
agctggtttgaaacccagcaggctgcggaaggtgaagaaaaagagatacaagaagttccc
agtgtttgcgctggagaaaatcctgaggacgcattttgtgctgtatgccatgataaattt
gaacaattttttcacgacgacgaagaagagtggcacttacgttcagcattgagggtagat
ggaaaaacatatcaccctctttgctatgatgattacaagcgttcgcttgagaggtcacta
gaagaacagtatgccacagaagatactgaagatgaaaataatacaggcaatgagatggac
aacaaagaagagggtgaagtaaaaatgatggataactcagttccacatgagaacaaagag
gaatcaatgaatggtcaggaatttaaaaccgaagaaggaaatgctgatgaaaaggtgggt
gacattgaagacctgcagcagcagcagcagcaggtggggaagacggggtcttgtaggaac
ctcctccacctagtgttgaacctatgcaactga
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