Cryptotermes secundus (drywood termite): 111872271
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Entry
111872271 CDS
T07421
Name
(RefSeq) 5'-3' exoribonuclease 2 homolog
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03008
Ribosome biogenesis in eukaryotes
csec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
111872271
09123 Folding, sorting and degradation
03018 RNA degradation
111872271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csec03021
]
111872271
03019 Messenger RNA biogenesis [BR:
csec03019
]
111872271
03009 Ribosome biogenesis [BR:
csec03009
]
111872271
03016 Transfer RNA biogenesis [BR:
csec03016
]
111872271
Transcription machinery [BR:
csec03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111872271
Messenger RNA biogenesis [BR:
csec03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
111872271
Ribosome biogenesis [BR:
csec03009
]
Eukaryotic type
Pre-60S particles
RNases
111872271
Transfer RNA biogenesis [BR:
csec03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
111872271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
LSO1_2-like
Motif
Other DBs
NCBI-GeneID:
111872271
NCBI-ProteinID:
XP_023721753
LinkDB
All DBs
Position
Unknown
AA seq
504 aa
AA seq
DB search
MRKEGMHHSSRVEQQMMGTDSSQALNSMLRPEGGGGQKRKSDQMAKDSDDEEEEETHDEV
RLWEDGFKDRYYESKFDVAPDNIEFRHRVAFQYVRGLCWVLKYYYQGCASWKWYFPYHYA
PFASDFLNIAELSTEFEKGTKPFRPLEQLMGVFPAASSSHVPAPWAKLMSDPESPIIDFY
PEDFKIDLNGKKFAWQGVALLPFVEEKRLFKALEPYYEVLTPGEKKRNVRGDDRLYVTLK
NSGYDFIKGLYENEIDLTDEVNVSIDGMQGTVLLAEDCVVPGGSLHSPVLGLSVLTKNNV
YCVRFRDPKYDDTFIFPAVRLKGAREPPRVLKPQDLSPSQNRRWRPQIGMAPATQRASLG
DAGHRMLGHHTNVRAGAGIYSSVPPVINQGLQALTRLAGLLQQHQYQPHHQQQQQQQQQS
NRGSSYRGSAGGGQHQRYNTWQDSSYNYNSSYNTGGSAYGQGRSYSYGSYPNGNQNNRRG
GGPGRRGWSSGGGGGGGGAYHSRR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaaagaaggcatgcatcacagcagtcgtgtggagcagcaaatgatggggacagat
tcttcacaggctttgaactctatgctgaggccagagggtggtggaggacagaagagaaaa
tcagaccagatggctaaagattctgatgatgaagaagaagaagaaacccatgatgaagtt
cgattatgggaagacggtttcaaagacagatactatgaatccaaatttgatgtggcccca
gacaacattgagttcaggcacagagtggcatttcagtatgttcgtggcctgtgttgggtg
ctgaaatattactatcagggctgtgcatcatggaaatggtactttccataccattatgct
ccttttgcatcagattttttgaatattgctgagttatcaactgaatttgagaaaggaacc
aaaccatttcgtccgttggagcagctgatgggtgtgttcccagcagctagcagctctcat
gtaccagcaccatgggcaaaactcatgagtgatccggagtctccaatcattgatttttac
ccagaagattttaaaatagacttaaatggaaagaagtttgcatggcaaggtgtagctttg
ttaccatttgttgaagagaagagattattcaaggcattagagccatactacgaagtctta
acccctggagaaaaaaaacgcaatgtaaggggagatgacagattgtatgtgacattgaag
aattctggctatgacttcattaagggcttatatgaaaatgaaattgacctcactgatgaa
gtgaatgtaagcattgatggaatgcaaggtactgttcttcttgcagaagactgtgtggtt
cctggaggatctctgcactcaccagtgttggggctgtcagttctgaccaaaaataatgtg
tactgtgtcagattccgggaccctaagtatgatgatacatttatatttccagcagttcgt
ctgaaaggagccagagagccaccaagagtgctgaagccacaagacttgagtccatctcag
aacaggagatggaggcctcaaattgggatggcaccagcaacacagagggcctcactgggt
gatgcagggcacaggatgcttgggcatcacacaaatgtgagagctggagcaggcatatac
agcagtgttcctcctgtgattaaccaaggactacaggccttgacaagacttgctggtctc
ctgcagcagcatcagtatcagccacatcaccagcagcaacagcagcagcagcagcagtca
aatagaggaagcagctacaggggaagtgctggcggcggtcaacaccagaggtacaatact
tggcaggattctagttacaactataactccagttacaacaccggcggatctgcttatggt
caagggcgatcatacagttatggctcgtaccctaacggcaatcagaataacaggcgtggt
ggcggccctggcaggagaggctggagcagcggtggcggcggcggcggcggcggcgcttac
cacagccgtcgctaa
DBGET
integrated database retrieval system