KEGG   Cryptotermes secundus (drywood termite): 111873446
Entry
111873446         CDS       T07421                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
csec  Cryptotermes secundus (drywood termite)
Pathway
csec03030  DNA replication
csec03410  Base excision repair
csec03420  Nucleotide excision repair
csec03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111873446
   03410 Base excision repair
    111873446
   03420 Nucleotide excision repair
    111873446
   03430 Mismatch repair
    111873446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csec03032]
    111873446
   03036 Chromosome and associated proteins [BR:csec03036]
    111873446
   03400 DNA repair and recombination proteins [BR:csec03400]
    111873446
DNA replication proteins [BR:csec03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    111873446
  DNA Replication Termination Factors
   ELG1-RFC complex
    111873446
Chromosome and associated proteins [BR:csec03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    111873446
DNA repair and recombination proteins [BR:csec03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     111873446
  Check point factors
   HRAD17(Rad24)-RFC complex
    111873446
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_11 AAA_assoc_2 ResIII RuvB_N AAA_14 AAA_lid_RFC1 RCF1-5-like_lid DUF815 DEAD AAA_30 PhoH AAA_24 AAA_16 AAA_5 AAA_7 AAA_19 ATPase_2 nSTAND_NTPase5 DNAX_ATPase_lid Thioredoxin_6 TIP49 BrkDBD Glyco_hydro_57
Other DBs
NCBI-GeneID: 111873446
NCBI-ProteinID: XP_023723942
LinkDB
Position
Unknown
AA seq 331 aa
MSKSKGPNLPWVEKYRPTKLDDLISHEDIIATINKFIKEDQLPHLLFYGPPGTGKTSTIL
ASAKQLYSQNQINSMVLELNASDDRGIGIVRGQILSFASTRTIFNTGFKLIILDEADAMT
NDAQNALRRIIEKFTENVRFCIICNYLSKIIPALQSRCTRFRFAPLTPEQILPRLEYVIE
QETVNVTEDGKKALLTLAQGDMRKALNILQSTSMAYKEVTEDNVYTCVGHPLKSDISNIV
KWLLNEDFSSAYKKIQDMKTAKGLALQDILTEVHLYIHRIELPSPALVGLIIKMADIEHR
LASGTNENIQLSALLSAFITARDMVPVVTES
NT seq 996 nt   +upstreamnt  +downstreamnt
atgtcaaagtccaaaggacctaatctaccttgggttgaaaaataccggccaacgaagcta
gatgatctaatttctcatgaagatataattgcaacaattaataaattcattaaagaagac
caactgcctcatttattattttatgggccaccaggaactggaaaaacaagcactattctg
gcttctgccaaacagttatattcacaaaaccagattaattcaatggtactggaattaaat
gcgtctgatgaccggggaattggtattgttcgtggtcaaatcttaagctttgcaagcacc
agaacaatcttcaacactggtttcaaactcataattctggacgaagcggatgccatgact
aatgatgctcaaaatgctttgaggcgaattatagaaaagttcacagaaaatgtaaggttc
tgcattatttgcaattacttgagcaaaataatccctgcattgcagtcacgatgtacaaga
ttccgatttgcaccacttacacctgagcagatcctgccaagattggaatacgttatagaa
caggaaactgtaaatgtaacagaagatggaaagaaagcacttctaacacttgctcaaggt
gacatgaggaaagcactaaacatcttacagagcacatcaatggcatacaaggaggtcaca
gaagataatgtgtatacatgtgttggtcatcctttgaagagtgacatttccaatattgtc
aaatggttgcttaatgaagatttttcatctgcatataaaaaaattcaagatatgaaaact
gccaaagggctggcactccaggacatcttgacagaagtccatctttatattcatagaatt
gaactcccttcacctgctctagtaggattgattattaaaatggctgacattgagcatcgt
ttagcatcaggaacaaatgaaaatatccagctcagtgccttgttgtctgcatttattact
gcacgagacatggtgcctgtggttacagagagttaa

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