Cryptotermes secundus (drywood termite): 117282829
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Entry
117282829 CDS
T07421
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
csec
Cryptotermes secundus (drywood termite)
Pathway
csec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117282829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csec03041
]
117282829
Enzymes [BR:
csec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
117282829
Spliceosome [BR:
csec03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117282829
Complex C
U4/U6.U5 tri-SnRNP related factors
117282829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_N
HA2_C
Helicase_C
DEAD
AAA_22
AAA_19
AAA_30
Flavi_DEAD
nSTAND3
SCO1-SenC
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
117282829
NCBI-ProteinID:
XP_033609978
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MDKHSKHHKRSRYESDSNSDDSTEKQRLRDLQERDEFADRLKKKDKEKIRNVTQPSGHEK
RAYEQAAKRFKQEAEGRSKIIPKLRVESRRKYLEKRKEDKVAELEADIIDDEYLFQEEEL
TERERKEREHKKKLLQLAKEHDQARELEKVQRYHMPEDLKKGQANEKYVEVDEREKAPHY
EQQKWEEEQMSSAVFRFGARDKEKIHEKGQEYDLVLDDEIEFIQALRMPGSKPDQEDENE
PKLTESEKKKVSLQETRRSLPIFPFRDDLIQAIENHQVLIIEGETGSGKTTQIPQYLYEA
GXTRGGKKIGCTQPRRVAAMSVSARVAQEMGVKLGNEVGYSIRFEDCTSERTVIKYMTDG
TLHREFLSEPDLQSYSVMIIDEAHERTLHTDILFGLVKDITRFRPELKLLISSATLDAQK
FSDFFDEAPIFRIPGRRYPVDIYYTKAPEADYIDACVVSVLQIHATQPVGDILVFLTGQE
EIETCQELLQERSRRLGSKIRELLILPVYSNLPSDMQAGIFQPTPPNARKVVLATNIAET
SLTIDNIIYVIDPGFCKQNNFNSHTGMESLIVVPISKASANQRAGRAGRVAAGKCFRLYT
AWAYKHELEDNTVPEIQRINLGNVVLTLKALGIDDLVHFDFLDPPPHETLVLALEQLYAL
GALNHHGELTKLGRRMAEFPVDPTMAKMILASEKYKCSEEILTIAAMLSVNGAIFYRPKD
KTVHADAARHSFYTPGGDHLMLLNIYTQWADSDFSTQWCYENFLQHRSLKRARDVRDQLA
GLMARVEIDLVSAAGDTAGIRKAITAGYFYHVARLSKGGQYKTVKHQQTVMIYPNSSMFE
DLPRWVIYHELMFTTKEFLHQVTEIESKWLLEVAPHYYKPRELEDSTNKKMPKMTGKSRA
ELRIN
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggacaaacattcaaaacaccataaaaggagcagatatgaatctgactctaattcagat
gacagtactgagaaacagaggcttagagatttacaggaaagagatgaatttgctgatcgt
cttaaaaagaaagataaagagaagatacgaaatgttactcagccatcaggccatgagaaa
cgagcttatgaacaagcagccaaacgatttaaacaggaagcagagggtcgttctaaaatc
attccaaagctgcgagtagaatcaagacgaaaatacttggagaagaggaaggaggataag
gtagcagaattggaggcagatatcattgatgatgaatatctgtttcaggaggaagagcta
actgaacgggagcgtaaggaacgtgaacacaagaagaaattacttcagttggcaaaggaa
catgaccaagcacgtgaacttgagaaagttcaacgttatcatatgccagaagacctcaag
aagggccaggctaatgagaaatacgtggaagtggacgagcgtgaaaaagcaccacattat
gagcagcagaaatgggaggaggagcaaatgtcatcagctgtgttccgctttggcgcacgt
gataaggagaaaattcatgaaaaaggtcaagagtatgacctggttttggatgatgaaatt
gaatttattcaggctttgaggatgccgggctccaagccagaccaagaggatgaaaatgaa
cctaaactgacagaatcagaaaagaagaaagtcagcctgcaagaaaccagaagaagctta
cccatctttccttttagagatgatcttatacaggcaattgaaaatcatcaggttttaatc
atagaaggggagacaggctctgggaaaacaactcagattccacagtatttgtacgaagct
gganttacacgtggtggtaagaagataggctgtacacagccacgtagagtggcagccatg
agtgtatcagcgcgtgttgcgcaggagatgggagttaagcttggaaatgaggttggctac
agcatcagatttgaggattgcacatctgagcggacagttatcaagtacatgactgatgga
acactacacagggagtttctctcagaacctgatctccagtcatacagtgtaatgatcatc
gatgaagctcatgaaagaactcttcacactgatattttatttggacttgttaaggacatt
accaggttcagacctgagcttaagctgctcatctcaagtgcaacgctggatgcacagaaa
ttctcagatttctttgatgaagcacctatctttagaataccaggacgtcgttatcctgtt
gatatttactatacgaaggccccagaagcagattatattgatgcgtgtgtggtatcagtg
cttcagatccatgcaacacaaccagtgggagatatattagtttttctcactggtcaagaa
gaaattgaaacttgccaagagctactacaggaacggtctcgccgtcttggttctaagata
agggagctgctcattctacctgtttactccaacttgccaagtgacatgcaggctggtata
tttcagcctactcctccaaatgcaagaaaagtggtactagcgacaaacattgcagagaca
tccctaactattgataacatcatttatgtaatagatccaggattttgtaaacaaaataat
ttcaattcacatacaggcatggaatcacttatagttgtgcctatctcaaaggcctctgca
aatcaacgagcagggcgtgcaggccgtgttgcagccggcaagtgtttccgtctttataca
gcctgggcatacaagcatgaattagaagataacacagtaccagagattcagcgtattaat
ttgggcaatgttgtattgacattgaaggctttaggaattgatgaccttgtacattttgac
tttttggatcctccacctcatgagacactggtgttggcattagagcagttatatgcactt
ggggcactcaatcatcatggagaactaacaaaactgggccgtcgaatggctgaatttccc
gttgatcccacgatggcaaaaatgatccttgcatcagaaaaatataagtgctcagaagag
attctgactattgcagcaatgctttctgtaaatggtgccattttctacagacccaaggac
aagacagtccatgctgatgctgcacgacatagcttctatacaccaggtggagaccatctc
atgctgctgaatatttacacacagtgggctgattctgacttctccacacagtggtgttat
gagaatttcttacagcatcgctctctgaaacgtgcacgtgacgtacgtgatcagttggca
gggctcatggcacgtgttgagatagatctggtttcagcagcaggtgacactgctggaatc
aggaaggcaatcacagctggatatttctatcatgtggctagactgtctaaaggaggccaa
tataaaacagtcaaacatcaacaaacagtgatgatatatccaaacagtagtatgtttgaa
gatttgcctcgctgggtgatatatcatgaacttatgtttacaaccaaggaattcttgcat
caggtgacagaaattgaaagtaaatggctccttgaagtcgcacctcattactacaaacct
cgtgagcttgaagattcaacaaataaaaagatgccaaagatgacaggaaagtcaagagca
gaactgagaattaattag
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