Citrobacter sedlakii: JY391_00545
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Entry
JY391_00545 CDS
T07832
Symbol
waaA
Name
(GenBank) lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
csed
Citrobacter sedlakii
Pathway
csed00540
Lipopolysaccharide biosynthesis
csed01100
Metabolic pathways
Module
csed_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
JY391_00545 (waaA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
csed01005
]
JY391_00545 (waaA)
Enzymes [BR:
csed01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
JY391_00545 (waaA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
JY391_00545 (waaA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
JY391_00545 (waaA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
JY391_00545 (waaA)
Lipopolysaccharide biosynthesis proteins [BR:
csed01005
]
Lipid A
JY391_00545 (waaA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glycos_transf_1
PCC_BT
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
QUC30295
LinkDB
All DBs
Position
complement(106717..107994)
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AA seq
425 aa
AA seq
DB search
MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRRPLKPGGIMLHSVSVGE
TLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGSDVQHVYLPYDLPDALGRFLNK
VDPKLVLIMETELWPNLIAALHKRNIPLVIANARLSARSANGYAKLGKFIRRILRRITLI
AAQNEEDGQRFVTLGAKNNQVTVTGSLKFDISVTPQLAAKAVTLRRQWAPHRPVWIATST
HDGEESIVIAAHQALLHQFPNLLLILVPRHPERFPDAINLVREAGLSYTTRSSGEVPSAS
TQVVVGDTMGELMLLYGIADLAFVGGSLVERGGHNPLEAAAHAIPVLMGPHTFNFKDICA
RLEQASGLITVTDATSLAKEVSSLLTDADYRNFYGRHAVEVLYQNQGALQRLLQLLEPYL
PPKTH
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaattgctttacaccgcccttctttacctgattcagccgctgatctggatacgg
ctgtgggtgcgcggacgtaaggccccggcctaccgtaaacgctggggtgaacgctacggc
ttttaccgccgccctcttaagccgggcgggatcatgcttcattctgtctccgtcggcgaa
acgctggcggctattcctttagttcgcgcgttacggcatcgctatcctgatctgccgatt
accgtcaccaccatgacgccaaccggctctgagcgggttcagtccgctttcggcagcgat
gtccagcacgtctatcttccctatgatttacccgatgcgcttggccgcttcctcaataag
gtcgaccccaaactggtattgattatggaaaccgaactgtggccgaacctgatcgccgcg
ctgcataagcgcaacatcccgctggtcatcgccaatgcgcgtctttccgcccgttctgcc
aacggttacgcgaagctggggaaatttatccgccgaatccttcgccgtattacgctaatt
gcggcgcaaaatgaagaagatggtcagcgctttgtgacgctgggcgcgaagaataatcag
gtcaccgtaaccggcagcctgaagtttgatatctccgttacgccgcagcttgcggcaaaa
gcggttacgctgcgccgtcagtgggccccccaccgcccggtgtggatcgccaccagcact
catgatggcgaagagagtattgtcatcgccgcgcatcaggcattgctccaccagttcccc
aacctgctgctgatcctcgtgccccgtcatccggagcgcttcccggatgcgattaatctc
gttcgtgaggcaggtctcagttacaccacacgctcttctggcgaggtgccctcggccagt
acccaggtggtggttggcgatacaatgggtgaactcatgctgctttacggcattgcggat
ctcgcctttgtcggaggatcgctggttgagcgaggtgggcataacccgctggaagctgcc
gcgcacgcgatcccggtgctgatgggtcctcacacctttaactttaaagatatctgcgct
cgtctggagcaagccagcggtctgattaccgtcaccgacgccaccagcctcgccaaagaa
gtttcctctttactgaccgacgccgattatcgtaatttttatggtcgtcacgcagttgaa
gtgctgtaccaaaaccagggcgcgctccagcgcttactgcaactgctggaaccttatctg
ccaccgaaaacgcattga
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