Citrobacter sedlakii: JY391_01030
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Entry
JY391_01030 CDS
T07832
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
csed
Citrobacter sedlakii
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
JY391_01030 (hmsP)
Enzymes [BR:
csed01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
JY391_01030 (hmsP)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
UL41A
Motif
Other DBs
NCBI-ProteinID:
QUC30386
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All DBs
Position
217098..219086
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AA seq
662 aa
AA seq
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MRVSRSLTIKQMAMVAAVVMVFVFIFCTVLLFHLVQQNRYNTATQLESIARSVREPLSAA
ILKADLPGAEAILASIKPAGVVQRADVVLPNQFQALRMSFIPERPVPVMVTRLFELPVQI
SLPVYSLERPANPQPLAYLVLQADSFRMYKFVMSTLSTLVTIYLLLSLMLTVAISWCVNR
LILHPLRKIARELNDIPQQDLIGHQLALPRLHHDDEIGMLVRSYNLNQQMLKRHSEELTG
NAMRFPVSELPNKAFLMGLLEQVVARQQTTALMIVTCETLRDTAGVLKEAQREILLLTLV
EKLKSVISPRMVLAQISGYDFAIVAHGVKEPWHAITLGQQVLTIINERLPVQGIQLRPSC
SIGVAMFYGDLSAEQLYVRAVSAAFTARRKGKNQIQFFDPEQMAQAQKRLTEESDILTAM
ENHQFALWLQPQVAIASGKVVSAEALLRLQQPDGSWALPEGLIERIESCGLMVTVGRWVL
EESCRLLAAWQERGMAMPLSVNLSALQLMHPTMVSDMLELLARYRIQPGTLILEVTESRR
IDDPHAAVAILRPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDVLKIDKMFVDGLPED
NSMITAIIQLARSLNLQTIAEGVENEAQRDWLAQAGVDIAQGYLFAHAVTAETFQEQYLT
HK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgtgagtcgctcgttaacaattaagcagatggcaatggtcgcggccgttgtcatg
gtgttcgtttttattttttgcaccgttttgctattccatctggtccagcagaaccgctat
aacacggctacgcaactggaaagtatcgcccgctccgttcgtgaacccttgtctgccgcc
atattaaaagcggatctccccggcgcggaggcgattctcgccagcataaaaccggctggg
gtggttcagcgcgccgatgtcgtgctgccaaatcagtttcaggcgctgcgcatgagcttc
attcctgaacgcccggtgccggttatggtcacccgactttttgaattaccggtgcaaatt
tccctgcccgtctattcgctcgagcgtccggcgaacccacagccgctggcctatctggtg
ctacaggcggattcgttccgtatgtataagttcgtcatgagcaccctctccacgttagtg
actatttacttacttttgtcactcatgctgaccgtggcgattagctggtgcgtaaaccgc
ctgattctgcacccgttgcgcaaaatcgcccgcgagctgaacgatattccgcaacaggat
cttatcgggcatcagctggcgctgccgcgtctgcaccatgacgatgagatcgggatgctg
gtgcgcagttataaccttaatcaacagatgcttaaacgccacagcgaagagttgacgggg
aacgcgatgcgttttccggtttccgagctgcccaacaaagcctttctgatggggttgctg
gagcaagtggtggcgcgacagcagaccaccgcgttgatgatcgtcacctgcgaaacgctg
cgtgataccgcaggcgtgctgaaagaggcgcagcgggaaatcctgctgctcacgctggtg
gaaaaactgaaatcggtgatttccccgcgaatggtgctggcccagatcagcggctacgac
tttgcgattgtcgctcacggcgtgaaagagccgtggcacgccatcacgttaggtcagcaa
gtgctcactattattaatgagcggttgccggtccaggggatccagctacgcccgagttgc
agcattggcgtggcgatgttttatggcgacctcagcgccgagcagctctacgttcgtgcc
gtttcggcggcgtttaccgcccgtcggaaaggcaaaaaccagattcagttcttcgaccct
gaacaaatggcgcaggcgcaaaaaaggctgaccgaagagagcgacattcttaccgcgatg
gaaaaccaccagtttgcgctctggctacagccgcaggtggcgatcgccagcggcaaggtg
gtgagcgcggaagcgctattgcgtttgcagcaaccggacggaagctgggcgttaccggaa
gggctgattgagcgcatcgagtcctgcggcctgatggtcaccgtggggcgctgggtactg
gaggagtcttgccgtctgcttgccgcctggcaggaacgcggaatggccatgccgctgtcg
gtcaacctgtcggcgctgcaactgatgcacccgaccatggtgtcggacatgcttgagctg
ctggcccgttatcgcatccagccgggtacgctgattctggaagtgaccgaaagccgccgt
atcgacgacccgcacgccgcggtggcgatattacgaccattgcgaaacgctggcgtgcgc
attgcgctggatgattttggtatgggttacgcggggttgcgtcagctccagcacatgaag
tcgctgccggtagacgtactgaaaatcgacaaaatgtttgtcgacggtctgccggaagat
aacagcatgatcacggcgattattcagctggcgcgtagcctgaatctgcaaacgatcgcc
gagggcgttgagaacgaggcgcagcgcgactggctggcgcaagccggtgtggatatcgct
cagggttatctttttgcccatgccgtgacggctgaaaccttccaggaacagtatctcacg
cacaagtga
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