Citrobacter sedlakii: JY391_02980
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Entry
JY391_02980 CDS
T07832
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
csed
Citrobacter sedlakii
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csed03016
]
JY391_02980 (truB)
Enzymes [BR:
csed01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JY391_02980 (truB)
Transfer RNA biogenesis [BR:
csed03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JY391_02980 (truB)
Prokaryotic type
JY391_02980 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QUC30753
LinkDB
All DBs
Position
609441..610385
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFTPEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRQEGNELELEVHCSKGTYI
RTIIDDLGEALGCGAHVTYLRRLTVSNYPVDRMVTLEQLRERVAQAEQQGIPAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTAGAPLDGLVRVTEGDDGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggtcgcgacattcacggtgtcctgctgctggacaagccg
cagggcatgtccagcaatgatgtcctgcagaaagtaaagcgcatttataacgccaaccgc
gccggacataccggtgcgctggatccgctggcgactggtatgctgccgatttgcctcgga
gaagcgacaaagttttcgcaatatctgctggattctgacaagcgctatcgtgtgattgcc
cgtctcgggcagcgaacggacacctccgatgccgacgggcaaatcgtgcaggagcgtccg
gtaacgtttacccctgagcagcttgccgccgcgctggatacctttcgtggcgacattgaa
cagatcccatcgatgtactcggcgctcaagtatcagggcaaaaagctctacgaatacgcg
cgtcaggggatagaagtaccgcgggaagcccgaccgataacggtttacgagctgctgttt
attcgccaggaagggaatgagcttgagctggaagtgcactgctcgaaaggcacctacatc
cgcaccatcattgacgatcttggcgaagcgctgggctgcggggcgcatgtcacctatctg
cgccgcctgacggtaagcaactatccggttgatcggatggtgacgctggaacaactgcgt
gagcgggtggcgcaagccgagcagcagggcattccggcggcgcagctgctggatccgctg
ctgatgccaatggacagtccggcctcggactacccggtcgttaatctgccgttaacctcc
tcggtttactttaaaaatggtaatccggtacgcaccgcgggcgcgccgctggacgggctg
gtccgcgtgacggaaggggatgacggtaagtttattggcatgggcgagatcgacgatgaa
ggccgcgtggcgcctcgtcggttagtggtggaatacccagcctga
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