Citrobacter sedlakii: JY391_03890
Help
Entry
JY391_03890 CDS
T07832
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
csed
Citrobacter sedlakii
Pathway
csed03410
Base excision repair
csed03430
Mismatch repair
csed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JY391_03890 (recJ)
03430 Mismatch repair
JY391_03890 (recJ)
03440 Homologous recombination
JY391_03890 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csed03400
]
JY391_03890 (recJ)
DNA repair and recombination proteins [BR:
csed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JY391_03890 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JY391_03890 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JY391_03890 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PEP-utilizers
Motif
Other DBs
NCBI-ProteinID:
QUC30922
LinkDB
All DBs
Position
813296..815029
Genome browser
AA seq
577 aa
AA seq
DB search
MKQQIQLRRREVDETAELPSDLSPLLRRLYASRGVRSARDLERSVKGMLPWQQLSGVEKA
VEILYNAFREGTRIIVVGDFDADGATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPE
VVDQAHARGAQLIVTVDNGISSHAGVDHASALGIPVVVTDHHLPGETLPAAQAIINPNLR
DCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDERGITPPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEVSNRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALALCEKLERSRDALPGGLAM
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLHP
GLMIKFGGHAMAAGLSLEESQFELFQQRFGELVTDWLDPSLLQGEVVSDGPLSAAEMTME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTT
CWPDNGVREVELAYKLDINEFRGNRSLQIIIDNIWPI
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacagcttcgtcggcgtgaggtcgatgagacggcggaactgccttcc
gacctctcgccattgttgcgccgcttgtatgccagccgcggcgtacgtagcgcacgggat
ctggaacgcagcgtaaaaggcatgctgccctggcagcagctaagcggcgtcgaaaaagca
gtggagatcctctataacgcgtttcgcgaggggacgcggattatcgtggtcggcgacttt
gacgccgatggcgcgaccagtaccgccctgagcgtgctgggtatgcgcgccttgggttgc
gataacatcagctatctggtgccgaaccgctttgaagatggctacggtctgagtccggaa
gtggtcgatcaggcccacgctcgcggcgcacagcttattgtcactgttgataacggcatc
tcctctcatgcgggcgtcgatcacgccagcgcgctggggataccggtggtggtgaccgat
caccatctcccgggcgagacgctgcctgccgctcaggccattatcaacccaaacctgcgt
gactgcgacttcccgtcgaagtcgctggcgggcgtgggcgtcgcgttttatctgatgctc
gcgctgcgcacgtttttgcgtgataagggttggtttgacgaacgcggtatcacgccgccg
aatctggcggaactgctggatctcgtggcgctcggcaccgtcgccgacgtggtaccgctg
gacgccaacaaccgtattttgacgtggcaagggctaagccggattcgcgccgggaagtgt
cggccaggaatcaaagcgctgctggaagtctcgaatcgcgacccgcaaaagctggccgcc
agcgacctgggttttgcactcggaccgcgtctgaatgccgcgggtcggctggatgatatg
tccgtcggcgtggcgttactgctgtgcgacaacattggcgaagcacgcgtgctggcgaat
gaactggacgcgctaaaccagacgcgcaaggagatcgaacagggaatgcaggcggaagcg
ctggccttgtgcgagaagcttgaacgcagtcgcgacgccctgccgggcggcctggcgatg
taccatcccgaatggcatcagggggtggtcgggatcctggcgtcacgcattaaagagcgc
tttcaccgtccggtcattgctttcgcgcctgcgggcgacggcacactgaaaggttctggc
cgctcgatccaggggctgcatatgcgcgatgcgctggagcggttagatacgctgcatccc
gggctgatgatcaaatttggcggccatgcgatggcggcgggattgtcgctggaggaatcg
cagtttgagctgtttcagcaacgctttggcgagctggtgactgactggctggatccttct
ctgctgcagggcgaagtggtttccgacggcccgctcagcgcggctgagatgacgatggaa
gtggcgcagatgctgcgcgacgcaggcccgtgggggcaaatgtttccggagccgctgttt
gacgggcgttttcgtttgctccagcagcgtctggtgggggaacggcacctgaaggtgatg
gtggagccggttggcggcgggccgctgctggacggtatcgcctttaacgtcgacaccacc
tgctggccggacaacggcgtgcgcgaagtggaactggcctataagctcgacatcaacgag
tttcgtggtaaccgcagcctgcaaattatcatcgacaatatctggccaatttag
DBGET
integrated database retrieval system
