Citrobacter sedlakii: JY391_04230
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Entry
JY391_04230 CDS
T07832
Name
(GenBank) PD40 domain-containing protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
csed
Citrobacter sedlakii
Pathway
csed00040
Pentose and glucuronate interconversions
csed01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
JY391_04230
Enzymes [BR:
csed01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
JY391_04230
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GFIT
Motif
Pfam:
Pectate_lyase22
PD40
Tricorn_N
Motif
Other DBs
NCBI-ProteinID:
QUC30981
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Position
complement(883350..884525)
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AA seq
391 aa
AA seq
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MAKGMRVKLNYEVSRDPDTGVEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHW
NYYLLDIAKAEAVQLTEGAGDNTFGGFLSPDDSALYYVKNDRTLFEVNLSTLAEREVYRV
PDEWVGYGTWVANSDCTKLVGIEIAKRDWTPLNDWKIFHDFFHKGPHCRLLRVDLRSGES
AVIHEEKIWLGHPIYRPFDDNTVAFCHEGPHDLIDARMWLVNEEGSNIRKVKDHAEGESC
THEFWVPNGSALVYVSYLKGQQGRTISSYNPDTGINEDIMPMPACSHLMSNFDGTLLVGD
GSGTPVDVKDTGGYTIDNDPYLYGFDVAKKAYFRIARHDTSWATVANSRQVTHPHPSFTP
DDRAVLFSSDKDGKPAIYLARLPEQPELLRL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggcatgcgggtcaaactgaactatgaggtcagtcgcgatccggatacaggc
gtggaagttacgcgtctgaccccaccggaagtaacgtgtcaccgaaactacttttatcaa
aaatgtttctttaatgacggtagccacctgctgttcgctggggagtttgacggccactgg
aactactatttactcgacattgcaaaagccgaggccgttcagttaaccgaaggcgcgggc
gacaacacctttggcggctttttatctccggatgatagcgcgctgtattacgtgaaaaac
gatcgtacgctgtttgaagtcaatctcagtaccctggccgagcgtgaagtgtatcgcgta
ccggatgaatgggtcggctatggcacctgggtggcaaatagcgactgtacgaagctggtc
ggcattgagattgccaaacgcgactggacgccgctgaacgactggaaaatcttccacgac
tttttccataaaggtccacactgtcgcttgctgcgggtggatctgagaagtggagaaagc
gcggtcattcatgaagaaaagatctggctgggccatccgatctatcgcccctttgacgac
aataccgtcgcgttttgccatgagggaccacacgatctgatcgacgcgcggatgtggctg
gttaacgaagagggtagcaatatccgcaaagtgaaagatcatgcagaaggcgaaagttgc
acccatgagttctgggtgccaaacggctccgcgttggtgtatgtttcctatctgaaaggg
cagcagggacgcacaatttccagctataaccccgacaccggcatcaatgaagacattatg
ccaatgccagcctgctcgcatctgatgagtaactttgacggcacgttgctggtcggcgat
ggctccggtacaccggtagacgtcaaagacactggcggatacaccattgataacgacccc
tatttatacggctttgacgtggcgaaaaaagcctatttccggattgcccgtcacgatacc
tcatgggcgacagtcgctaacagccgccaggtaacccacccgcatccgtcgtttactccg
gacgatcgcgcggtattattcagctctgacaaagacggcaaaccggcaatttatctcgcc
agactgcccgaacaaccggaattattgcgactgtga
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