Citrobacter sedlakii: JY391_05585
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Entry
JY391_05585 CDS
T07832
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
csed
Citrobacter sedlakii
Pathway
csed02024
Quorum sensing
csed03060
Protein export
csed03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JY391_05585 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JY391_05585 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JY391_05585 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
csed02044
]
JY391_05585 (ffh)
Enzymes [BR:
csed01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JY391_05585 (ffh)
Secretion system [BR:
csed02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JY391_05585 (ffh)
Eukaryotic Sec-SRP protein
JY391_05585 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
cobW
AAA_30
AAA_31
AAA_16
AAA_24
AAA_33
Helicase_RecD
APS_kinase
AIP3
GlnD_UR_UTase
AAA_14
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
QUC31221
LinkDB
All DBs
Position
1184587..1185948
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AA seq
453 aa
AA seq
DB search
MFDNLTDRLSRTLRNISGRGRLTEDNVKETLREVRMALLEADVALPVVREFINRVKEKAV
GHEVNKSLTPGQEFVKIVRNELVAAMGEENQSLNLAAQPPAVVLMAGLQGAGKTTSVGKL
GKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNGALKEAK
LKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEAL
PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTDALEPFHPDRIASRILGMGDV
LSLIEDIESKVDRAQAEKLATKLKKGDGFDLTDFLEQLRQMKNMGGMASLMGKLPGMGQI
PDNVKSQMDDKVLVRMEAIINSMTLKERAKPEIIKGSRKRRIAAGCGMQVQDVNRLLKQF
DDMQRMMKKMKKGGMAKMMRSMKGMMPPGFPGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaaccgatcgtttgtcgcgcacgctgcgcaatatcagtggccgtgga
cgccttactgaagacaacgttaaagagacgctgcgcgaagtgcgcatggcgctgctggag
gctgacgttgcgctgccggtagtgcgtgagtttatcaatcgcgtaaaagagaaagcggtt
ggccacgaagtcaacaagagcctgacgccggggcaagagttcgtcaaaattgttcgtaac
gaactcgtcgcggcgatgggcgaagaaaaccagtccctgaacctggccgcgcaaccgccc
gccgtggtgttgatggcggggttgcagggggcgggtaaaaccaccagcgtcggcaaactg
ggtaaattcctgcgtgaaaagcacaaaaagaaagtgctggtcgtttctgcggacgtgtat
cgtccggcggcgatcaaacagctggaaacgctggccgagcaggttggcgtggatttcttc
ccgtctgacgtcggccagaagcccgtcgatatcgttaacggcgcgctgaaggaagcgaag
ctgaagttctacgacgtgctgctggtggataccgctggtcgtctgcacgttgacgaagcg
atgatggacgaaatcaagcaggttcacgcttctatcaatccggtagagaccctgtttgtg
gtcgacgccatgaccggtcaggatgcggcgaacaccgcgaaggcgtttaacgaagcgctg
ccgctgaccggcgtggtgctgactaaagtcgacggcgatgcccgtggcggcgccgcgctc
tctattcgtcatatcaccggtaagccgatcaagttcctcggcgtgggcgagaaaaccgac
gcgctggagcctttccacccggatcgtattgcttcacgcattctcggtatgggcgatgtg
ctgtcgctgatcgaagatatcgaaagcaaagttgaccgcgcgcaggccgagaagctggcg
accaagctgaaaaaaggcgacggtttcgatctcaccgacttccttgagcagctgcgccag
atgaaaaatatgggcggcatggcgagcctgatgggcaagctgccgggcatgggccagatt
cccgataacgttaaatcgcagatggatgacaaagtgctggtgcgcatggaagcgatcatc
aactcgatgacgttgaaagagcgcgcgaagccggaaatcatcaaaggctcccgcaaacgc
cgtatcgcagccggctgcggcatgcaggtgcaggacgttaaccgcctgttgaaacagttc
gacgacatgcagcgcatgatgaagaagatgaagaagggcgggatggcgaagatgatgaga
agtatgaaggggatgatgccgccaggcttccctggccgctga
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