Citrobacter sedlakii: JY391_07630
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Entry
JY391_07630 CDS
T07832
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
csed
Citrobacter sedlakii
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csed03032
]
JY391_07630 (gyrA)
03400 DNA repair and recombination proteins [BR:
csed03400
]
JY391_07630 (gyrA)
Enzymes [BR:
csed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JY391_07630 (gyrA)
DNA replication proteins [BR:
csed03032
]
Prokaryotic type
DNA Topoisomerases
JY391_07630 (gyrA)
DNA repair and recombination proteins [BR:
csed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JY391_07630 (gyrA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QUC31588
LinkDB
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Position
1602787..1605423
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AA seq
878 aa
AA seq
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MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARAEVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALIARPWDLGNV
AAMLERAGDDAARPEWLEPEFGVRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLEQIAELLHILGSADRLMEVIREELELIRDQFGDARRTEITANSADINIEDLINQEDVV
VTLSHQGYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGVNVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAVRAMGRTATG
VRGIKLAGEDKVVSLIIPRGEGAILTVTQNGYGKRTAADEYPTKSRATQGVISIKVTERN
GSVVGAVQVDDCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVA
EPVDDEELDSIDGSVAEGDDDIAPEAETDDDAADDADE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgcgagagaaattacaccggtcaacattgaggaggagctgaaaagctct
tatctggattacgcgatgtcggtcattgttggccgtgcgctgccggatgtccgagatggc
ctgaagccggtacaccgtcgcgtactttacgccatgaacgtattgggcaatgactggaat
aaagcctataaaaaatctgcccgtgtcgttggtgacgtaatcggtaaataccatcctcac
ggcgattccgcggtgtatgacaccattgttcgtatggcgcagccgttttcgctgcgctat
atgctggtggatggtcagggtaacttcggttctatcgacggcgactctgctgcggcgatg
cgttatacggaaatccgtctggcgaagattgcccatgaactgatggccgatctggaaaaa
gagacggtagatttcgttgataactatgacggcacggagaaaatccctgacgttatgcca
acgaagatcccgaacctgctggtaaacggttcgtccggtatcgcggtaggtatggcgacc
aacatcccgccgcacaacctgacggaagtgatcaacggttgcctggcctatatcgacgat
gaagacatcagcattgaagggctgatggaacacatcccgggtccggacttcccgactgcg
gcgatcattaatggtcgtcgcggcattgaagaagcctaccgtaccggtcgcggcaaagtg
tacattcgcgcgcgcgccgaagtggaagcggacgcgaaaaccggtcgcgaaaccattatc
gttcatgaaatcccgtaccaggtgaacaaagcgcgcctgatcgagaaaatcgctgagctg
gtaaaagataagcgcgttgaaggcatcagcgcactgcgtgacgagtccgataaagacggt
atgcgcattgtgattgaagtgaaacgcgatgcggttggggaagtggttctgaacaacctc
tattcccagacgcagctgcaggtctccttcggtattaacatggtggcgttgcaccacggc
cagccgaagatcatgaacctgaaagatatcatttccgcgttcgtgcgccatcgccgtgaa
gtggtgactcgccgtaccattttcgaactgcgtaaagcccgcgatcgcgcgcatatcctt
gaagcgttggcgattgcgctggcgaacatcgatccgatcattgaactgatccgccgcgcg
ccgactccggcagaagcgaaagccgcgctgatcgcgcgtccgtgggatctgggcaacgtg
gcggcgatgctggagcgtgcgggcgatgacgctgcgcgtccggaatggctggaaccggaa
ttcggtgtgcgtgatggtcagtactatctgactgaacagcaggctcaggcgattctggat
ctgcgcttgcagaagctgaccggtcttgagcatgaaaaactgctcgatgagtacaaagag
ctgctggagcagatcgctgaactgctgcatattctgggcagcgccgatcgtctgatggaa
gtgatccgcgaggagctggagctgatccgcgatcagttcggcgatgcgcgccgcaccgaa
atcaccgccaacagcgcggacatcaacatcgaagacctgatcaaccaggaagacgttgtg
gtgactctgtcgcaccagggttacgtgaagtatcagccgttgaccgactacgaagcccag
cgccgtggcggaaaaggcaaatcagcggcacgcattaaagaagaagactttatcgaccgc
ctgctggtggccaacacccacgacaccatcctctgcttctccagccgtggacgcctgtac
tggatgaaagtttaccagttgccggaagcgagtcgcggcgcgcgtggtcgtccgatcgtt
aacctgctgccgttagaagctgatgaacgtatcaccgctatcctgccggtacgcgagtac
gaagagggcgtgaacgtctttatggcgaccgccagcggtacggtgaagaaaaccgcgctg
accgagttcagccgcccgcgttccgccggtatcattgcggtgaacctgaacgagggcgac
gagctgattggcgtcgatctcacctctggctccgatgaagtcatgctgttctctgccgcc
ggtaaagtggtgcgctttaaagaggacgccgtccgtgcgatgggccgtaccgcgaccggc
gtgcgcggcatcaagctggcgggcgaagacaaggtggtttcgctgattattcctcgtggc
gaaggcgctatcctgaccgtgacgcaaaacggttacggtaagcgtaccgcggcggacgaa
tatccgaccaagtcacgtgcgacacagggtgttatctctatcaaagtgaccgagcgcaac
ggttccgttgttggcgcggtgcaggtagacgattgtgaccagatcatgatgattaccgat
gccggtacgctggtgcgtacccgcgtgtcggaaatcagcgtggtgggtcgtaacacccag
ggcgtgatcctcatccgtactgcggaagatgaaaacgtcgtgggcctgcagcgtgttgct
gaaccggtggatgacgaagagctggattctatcgacggcagcgtcgcggaaggggatgat
gacatcgctccggaagcggaaaccgacgacgatgcggcggatgacgcagacgagtaa
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