Citrobacter sedlakii: JY391_08415
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Entry
JY391_08415 CDS
T07832
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
csed
Citrobacter sedlakii
Pathway
csed03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JY391_08415 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csed03400
]
JY391_08415 (alkA)
Enzymes [BR:
csed01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
JY391_08415 (alkA)
DNA repair and recombination proteins [BR:
csed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JY391_08415 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QUC31740
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All DBs
Position
1787347..1788216
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AA seq
289 aa
AA seq
DB search
MFFLNWQPPYDWSWMLGFLAARAVSGVEMVGDMRYTRSLAVGEHRGIVSVVPDERTHTLA
VTLTGGLLPVADVCLEKMARLFDLGCEPTKITRALGDLGAARPGLRLPGSVDAFEQGVRA
ILGQLVSVAMAAKLTAKVAQRYGEPLADAPGYVCFPGPDILAGADPLDLKALGMPLKRAE
ALIHLARAARDGILPTSAPEDVESGVKALQAFPGIGRWTANYFALRGWQAKDVFLPDDYL
IKQRFAGMTSAQIRRYAERWKPWRSYALLHIWYTDGWQPSVDGEVTGIQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgttttttctgaactggcagccgccttatgactggtcctggatgttgggttttctcgcc
gctcgtgcggtgagcggtgtggaaatggtcggtgatatgcgctatacgcgcagcctggcg
gtaggggagcatcgggggatagtcagcgtggtgcccgatgaacggacgcatacgctggcg
gtcaccttaaccggggggctgctgccggtagcggatgtctgtctggaaaaaatggcgcgg
ttgttcgatctcggctgcgagccgacgaaaatcacccgggcacttggcgatctgggcgcg
gcgcgtccggggttgcgcctgcccggttcggtagatgcctttgagcaaggtgtacgggca
atcctggggcagttagttagcgtggcgatggcggcaaagctcactgcaaaagtggcgcag
cgctatggcgaaccgctggccgacgcgccaggctacgtctgtttccccggccctgacatc
cttgccggcgccgatccgctggatctgaaagcgctgggaatgccgcttaaacgcgctgag
gcgctgatccacctcgcgcgggccgcgcgtgacgggatactgcccaccagcgcgcctgaa
gatgttgagtctggggtgaaagcgctacaggcgtttccggggattggacgctggacggcg
aactatttcgcactcagaggctggcaggcgaaagacgtgtttttgccggatgattacctg
atcaaacagcgatttgcgggcatgacgtcggcgcagatccggcgctacgcggagcgctgg
aaaccctggcgctcctacgccctgttgcacatttggtataccgacggctggcaaccgtca
gttgatggcgaagtaactggtattcagtag
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