Citrobacter sedlakii: JY391_09495
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Entry
JY391_09495 CDS
T07832
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
csed
Citrobacter sedlakii
Pathway
csed03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JY391_09495 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csed03400
]
JY391_09495 (ruvB)
Enzymes [BR:
csed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JY391_09495 (ruvB)
DNA repair and recombination proteins [BR:
csed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JY391_09495 (ruvB)
RecFOR pathway proteins
JY391_09495 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
AAA_14
Rad17
AAA_16
nSTAND3
TIP49
AAA_2
AAA_18
AAA_17
RNA_helicase
NTPase_1
Bac_DnaA
AAA_28
NB-ARC
AAA_24
ABC_tran
TsaE
NPHP3_N
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
QUC31934
LinkDB
All DBs
Position
1989417..1990427
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AA seq
336 aa
AA seq
DB search
MIEADRLISAGATIAEEVADRAIRPKLLDEYIGQPQVRSQMEIFIQAAKLRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVPDLQHIVGRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG
TISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPEMP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagcagatcgcctgatttcggcaggcgccaccattgcagaagaggtggccgat
cgtgccattcgcccgaaattactggatgaatatattggtcaaccgcaggtgcgttcgcaa
atggagatatttatccaggcggcgaaactacgcggcgacgcgcttgaccatctgctgatt
tttggaccgccggggcttggcaaaaccacgcttgcgaatatcgtggcaaacgaaatgggc
gtgaacctgcgtaccacatcaggcccggtgttggagaaagccggtgacctggcggcgatg
ctcaccaacctggaaccgcatgacgtgctgtttatcgatgagatccatcgactgtcgccg
gtggtggaagaggtgctgtacccggcgatggaagactatcagctggacattatgatcggt
gaaggacctgcagcgcgctccattaaaatcgatttaccgccgtttacgctgattggcgcg
acgacccgcgccggatcgttgacttcgccgctgcgcgaccgctttggtatcgtccagcgc
cttgagttttatcaggtgcccgatcttcagcatattgtgggccgcagcgctcgctttatg
gggcttgagatgagcgatgacggggcgctggaagtcgcgcgacgcgcgcgcggtacgccg
cgtattgccaaccgcttgctcagacgcgtccgtgatttcgccgaagtgaagcatgatggc
acgatttcagcggatattgccgcccaggcgctggacatgctgaatgtcgatgcggaaggg
tttgattatatggaccgcaagctgttgctggcggtgattgataagttctttggcggtccg
gttgggctcgataacctggcggcggcaatcggtgaagagcgcgaaaccattgaagatgtg
ctggagccgtatttaattcagcagggctttttgcaacgtacgccacgcggaagaatggcg
acggtgcgggcctggaaccattttggtatcaccccgccggaaatgccttaa
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