Citrobacter sedlakii: JY391_12930
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Entry
JY391_12930 CDS
T07832
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
csed
Citrobacter sedlakii
Pathway
csed00061
Fatty acid biosynthesis
csed00071
Fatty acid degradation
csed01100
Metabolic pathways
csed01212
Fatty acid metabolism
csed02024
Quorum sensing
csed04146
Peroxisome
Module
csed_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
JY391_12930 (fadD)
00071 Fatty acid degradation
JY391_12930 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
JY391_12930 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
JY391_12930 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
csed01004
]
JY391_12930 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csed04147
]
JY391_12930 (fadD)
Enzymes [BR:
csed01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
JY391_12930 (fadD)
Lipid biosynthesis proteins [BR:
csed01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
JY391_12930 (fadD)
Exosome [BR:
csed04147
]
Exosomal proteins
Exosomal proteins of breast milk
JY391_12930 (fadD)
Exosomal proteins of breast cancer cells
JY391_12930 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Pept_S41_N
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QUC28457
LinkDB
All DBs
Position
complement(2694348..2696033)
Genome browser
AA seq
561 aa
AA seq
DB search
MKKVWLNRYPADVPAEINPDRYQSLVELFEHAVARYADQPAFVNMGEVMTFRKLEERSRA
FAAYLQEGLGLKKGDRVALMMPNLLQYPVALFGILRAGMIVVNVNPLYTPRELEHQLNDS
GAAAIVIVSNFAHTLEKVVEKTQVQHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYHL
PDAISFRSALHAGYRMQYVKPEVVSEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQVKA
TYGPLLHPGKELVVTALPLYHIFALTMNCLLFIELGGQNLLITNPRDIPGLVKELAKYPF
TAMTGVNTLFNALLNNKEFQQLDFSSLHLSAGGGMPVQQAVAERWVKLTGQYLLEGYGLT
ECAPLVSVNPHDIDYHSGSIGLPVPSTEAKLVDDDDNEVPPDQPGELCVKGPQVMLGYWQ
RPDATDEIIKDGWLHTGDIAVMDDEGFLRIVDRKKDMILVSGFNVYPNEIEDVVMQHPGV
LEVAAVGVPSGSSGEAVKIFVVKKDPSLTDEALVTFCRRQLTGYKVPKLVEFRDELPKSN
VGKILRRELRDEARAKVDNKG
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaaggtttggttaaaccgttatcccgcggatgtgcctgcggagatcaatcctgac
cgttatcaatccctggtagaactgtttgagcatgctgtcgcgcgttacgccgatcagccc
gcgttcgttaatatgggggaggtgatgaccttccgcaagctggaagagcggagcagggcg
tttgcggcctatttgcaggaagggctgggtctgaaaaagggcgatcgcgtcgcgctaatg
atgccaaacctgttgcagtatcccgtcgcgctgtttggcattctgcgtgccgggatgatc
gtggtgaacgtcaacccgctatacacgccgcgcgagctggagcatcagctcaacgacagc
ggcgcggcggcgatcgtcattgtctcgaacttcgcccacaccctggaaaaagtggttgag
aaaacccaggttcaacacgttattctgacccgcatgggcgaccagctgtcgacggcaaaa
gggacgctggtgaactttgtggtcaaatacatcaaacgtctggtgccaaagtaccatctg
ccggatgccatctcgtttcgcagcgcgctacatgcgggctaccgcatgcagtacgtcaag
ccggaagtggtgtctgaggatttggctttcctgcaatatactggcggcacgaccggcgtg
gcgaaaggcgcgatgctcacccatcgcaatatgctggctaaccttgagcaggtgaaagcg
acctatggaccgctcctgcatccggggaaagagctggtggtgaccgcactgccgctgtac
cacatattcgcgttgaccatgaactgcctgctgtttatcgaactgggcgggcagaacctg
ctcattaccaacccgcgcgatattccggggctggtgaaagagttggcaaaatacccgttt
accgccatgaccggcgtgaacaccctgtttaacgcgttgctgaataataaagagttccag
caactggatttctcctccctgcatctttccgccggcgggggtatgccggtgcagcaggcg
gtagctgaacgctgggtgaaactgaccgggcagtatctgctggaaggctatggcctgacc
gaatgcgcgccgctggtcagcgtgaacccgcatgatattgactatcacagcggcagcatt
gggttgccggtgccgtctaccgaagctaagctggtggacgatgatgataacgaagtgccg
ccggatcagcccggcgaactgtgcgtcaaaggtccgcaggtgatgctcggttactggcag
cgtccggatgcgaccgacgagatcatcaaggacggctggctgcatacgggtgatatcgcg
gtgatggacgatgagggttttttgcgcattgtcgaccgtaagaaagacatgattctggtc
tcaggtttcaacgtttatccaaacgagatcgaagatgttgtgatgcagcatccgggagtc
ctggaggtcgcggccgtcggcgtgccgtccggcagcagcggcgaagcggtgaagattttc
gtggtgaaaaaagatccttcattaacggacgaggcgctggtgactttctgccgccgccag
ttaaccggctataaggtgcctaagctggtggagttccgcgatgaattgccaaaatccaat
gtcggaaaaattttacgtcgagaattgcgtgacgaagcccgcgccaaagtagacaataaa
ggctga
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