Citrobacter sedlakii: JY391_14355
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Entry
JY391_14355 CDS
T07832
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
csed
Citrobacter sedlakii
Pathway
csed03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JY391_14355 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csed03019
]
JY391_14355 (rhlE)
Enzymes [BR:
csed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JY391_14355 (rhlE)
Messenger RNA biogenesis [BR:
csed03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JY391_14355 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QUC28725
LinkDB
All DBs
Position
complement(3010739..3012097)
Genome browser
AA seq
452 aa
AA seq
DB search
MSFDSLGLNPEILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITQQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRITTPGYEPDPSIKAEPIQNGRQQRGGGGGRGRQGQGQGAGRGQQPRRQDG
GAPKAKPRSGEGKPAGDKPRPPRRPRRITPAQ
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctgggtttgaaccctgaaattctgcgcgccattgccgagcagggt
taccgtgaacctacccctattcagcagcaggcgatccctgcggtgctggaaggccgtgac
ctgatggcgagcgcgcagaccggcaccggtaaaaccgctggcttcacgctgccgttgttg
cagcaccttattacacagcagccccatgccaagggccgtcgtccggtacgggcgctgatc
ctgacgcccacccgcgaactggcggcgcagattggcgagaacgtccgtgattacagtaag
tatctgaacattcgttcgctggtggtcttcggcggcgtgagcattaacccgcagatgatg
aagctgcgcggcggtgtggatgtgctggtggcgacgccgggccgtttgctggatctcgaa
caccagaatgcggtgaagctggatcaaattgaaatcctggtgctcgacgaagctgaccgc
atgctggatatgggctttattcacgatatccgtcgcgtgctggcgaagctgccggcgaag
cgccagaacctgctgttctctgcgaccttttctgacgacatcaaggcgcttgccgaaaag
ctgctgcataacccgctggagatcgaagtggcgcgtcgcaacaccgcttctgagcaggtg
acgcagcacgttcatttcgtcgacaaaaaacgcaaacgcgaactgctttcccagatgatc
ggccaggggaactggcagcaggtgctggtattcacccgcaccaagcacggcgctaaccat
ctggcggagcaactgaataaagacggcattcgcagcgcggcgatccacggcaacaagagc
cagggcgcacgtacccgcgcgctggctgatttcaaatccggcgatattcgcgtgctggtg
gcgaccgacatcgcggcgcgtggactggatattgaagaactgccgcacgtggtgaactat
gaactgccgaacgtgccggaagattatgtccaccgtatcgggcgtaccgggcgtgccgcc
gccaccggcgaggcgctgtcgctggtgtgtgtcgatgaacataagctgctgcgcgatatt
gaaaaactgctgaagaaagagatcccgcgcatcaccacgccgggttatgagccggacccg
tcaatcaaagcggagcccatccagaacgggcgccagcagcgtggcggcggtggcggtcgt
ggccgccagggacaaggtcagggagcgggccgtgggcaacagccgcgtcgtcaggacggc
ggcgcgccgaaagccaaaccgcgcagcggcgaaggcaaaccggcgggtgataagccgcgt
ccgccgcgccgcccgcgccggattaccccggcacagtaa
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