Citrobacter sedlakii: JY391_16565
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Entry
JY391_16565 CDS
T07832
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
csed
Citrobacter sedlakii
Pathway
csed00900
Terpenoid backbone biosynthesis
csed01100
Metabolic pathways
csed01110
Biosynthesis of secondary metabolites
Module
csed_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JY391_16565 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
csed01006
]
JY391_16565 (ispA)
Enzymes [BR:
csed01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
JY391_16565 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
JY391_16565 (ispA)
Prenyltransferases [BR:
csed01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
JY391_16565 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Arm-DNA-bind_3
Motif
Other DBs
NCBI-ProteinID:
QUC29129
LinkDB
All DBs
Position
3441560..3442459
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AA seq
299 aa
AA seq
DB search
MDFTQQLQACVEQANQALNRFIAPLPFQNTPVVETMLYGALLGGKRLRPFLVYATGQMFG
VSKGTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHVKFGEANAILAGDALQTL
AFSIISDAPMPEVSDRDRIAMISELANASGIAGMCGGQALDLNAEGKQVPLDALEKIHRH
KTGALIRAAVRLGALSAGEKGRNALPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARNKARDLIEEARQSLNQLAVQSLDTSALEALADYIIQRDK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggattttacccagcagctacaggcttgcgtggagcaggccaatcaggcgctaaaccgt
tttatcgctccactgccctttcagaacactcccgtggtcgaaaccatgttgtatggcgca
ttattagggggtaaacgcctgcgcccgtttttggtttacgccaccggccagatgtttggc
gtcagcaagggtacgctggacgccccggccgccgccgttgagtgcattcacgcctattcg
ctcattcacgacgatttaccggcgatggatgacgacgatttgcgccgcggcctgccgacc
tgccacgtcaaatttggcgaagcgaacgccattctcgctggcgacgccctgcaaacgctg
gcgttttccatcatcagcgacgcgccgatgccggaagtgagcgaccgcgatcgcatagcg
atgatttccgaactggcgaacgccagtgggattgcggggatgtgcggcggtcaggcgctc
gatctgaacgctgaaggtaagcaggtgccgctggacgcgctggagaaaatccaccgccat
aaaaccggcgcattgatccgcgccgcagtgcgcctgggcgcgttaagcgcgggcgaaaaa
gggcgaaacgccctgccgatactcgacaaatacgcagaaagtatcggcctggccttccag
gttcaggatgacattctggatgtggtgggcgatactgcaacgttgggtaaacgccagggt
gccgaccagcagcttggcaaaagtacctatcctgcacttctgggtcttgagcaagcccgg
aataaagcccgggatttaatcgaagaggcccgtcagtcattaaaccagctggccgttcag
tctctcgatacctcggcactggaagcgctagcggactacataatccagcgtgataaataa
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