KEGG   Citrobacter sedlakii: JY391_17415
Entry
JY391_17415       CDS       T07832                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
csed  Citrobacter sedlakii
Pathway
csed03030  DNA replication
csed03430  Mismatch repair
csed03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:csed00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    JY391_17415 (dnaE)
   03430 Mismatch repair
    JY391_17415 (dnaE)
   03440 Homologous recombination
    JY391_17415 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csed03032]
    JY391_17415 (dnaE)
   03400 DNA repair and recombination proteins [BR:csed03400]
    JY391_17415 (dnaE)
Enzymes [BR:csed01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     JY391_17415 (dnaE)
DNA replication proteins [BR:csed03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     JY391_17415 (dnaE)
DNA repair and recombination proteins [BR:csed03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     JY391_17415 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP DNA_pol_IIIA_C HHH_6 tRNA_anti-codon
Other DBs
NCBI-ProteinID: QUC29283
LinkDB
Position
complement(3630970..3634452)
AA seq 1160 aa
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFHVQSEQMGEELTHLTVLASNNTGYQNLTLLISKAYQRGYGAAGPVIDRDW
LIELKEGLILLSGGRMGDVGRSLLRGNSALVEECVSFYETHFPDRYFLELIRTGRQDEES
YLHAAVELAEARGLPVVATNDVRFINSDDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RTEEEMCELFSDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKSKEGL
EERLEFLFPDAEERKKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEQGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSVFEEGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq 3483 nt   +upstreamnt  +downstreamnt
atgtctgaacctcgtttcgtccacctgcgggtgcacagcgactactccatgatcgatggg
ctggccaaaaccggaccgctggtgaaaaaggcggccgcactgggcatgcccgcgctggcg
atcaccgattttaccaacctttgcggtctggtgaagttctacggggcgggtcatggcgcc
gggattaaacccattgttggcgccgatttccacgttcagagcgaacaaatgggtgaagaa
ctcactcatttaacggtgctggcgtcgaataacaccggttatcagaaccttacgctgctt
atttctaaagcttatcaacgcggttacggcgcggcgggtccggttatcgatcgcgactgg
ctgatcgaactgaaagaggggttaattctgctttccggtggacgcatgggcgacgttggc
cgcagcctgttgcggggaaatagcgcgctggttgaggagtgcgtctcgttctatgaaacg
catttcccggatcgttacttccttgagctgatccgtaccggcagacaggatgaagaaagc
tatttgcacgcagccgtagaactggcggaagcgcgcggcttgccggtcgtcgctaccaac
gacgtgcgctttattaacagcgatgattttgacgcgcatgaaattcgcgtcgccattcac
gacggttttactctcgacgaccctaagcgcccacgtaactattcgccgcagcagtatatg
cgtacggaagaggagatgtgcgagctcttctcggacattccggaagcactggaaaacacc
gttgagatcgccaaacgctgtaacgtgacggtgcgtctgggcgaatatttcctgccgcag
tttccgaccggtgatatgaccaccgaagactatctggtcaagaaatcgaaagaaggtctt
gaagagcgtcttgaattcctgttcccggatgcagaagagcgtaaaaaacgccgcccggaa
tatgacgagcgtctggacattgagctacaggttattaaccagatggggttccccggctac
tttctgatcgtgatggagtttatccagtggtcgaaggataacggcgtgccggtcgggcca
ggccgtggttccggcgcgggatcgctggtggcctacgcgctgaaaatcaccgacctcgac
ccgctggaatttgacctgctgttcgaacgcttccttaacccggagcgtgtttcgatgcct
gacttcgacgttgacttctgtatggagaaacgcgaccaggtgatcgagcacgtggcggat
atgtatgggcgtgatgcggtatcgcagattattactttcggtaccatggcggcgaaagcg
gttatccgtgacgtgggccgcgtgctgggccatccgtatggcttcgtagaccgtatttca
aagctggtgccgcccgatccgggcatgacgctggcaaaagcgtttgaagctgagccgcaa
ctgccggaaatctacgaagccgacgaagaggtcaaagcgctgatcgacatggcgcgtaag
ctggagggcgtcacgcgtaacgccggtaagcacgccggtggtgtggttatcgccccgacg
aaaattaccgattttgcgccgctgtattgcgatgagcaggggctgcatccggttacgcag
tttgataaaaacgacgtggaatacgccgggctggtgaagtttgacttcctcggcctgcga
acgctcacgattatcaactgggcgctggaaatgattaacgcccgtcgtgagaaaaacggc
gagccgccgctggatattgcggccatcccgctggatgacaagaaaagcttcgacatgctg
caacgctcggaaaccacggcggtgttccagcttgaatcccgcggcatgaaagatttgatc
aagcgtctgcaacctgactgctttgaagatatgatcgcgctggtggcgctgttccgcccg
ggcccgctgcagtcggggatggtggataacttcatcgaccgtaagcacgggcgtgaagaa
atttcttatcctgacgtacagtggcagcacgaaagcctgaagcccgtactggaaccgacc
tatggcatcatcctgtatcaggaacaggtcatgcagatcgcccaggtgctgtctggttat
accctcggcggcgcggacatgttacgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaaacagcgatctgtctttgaagagggcgcgaagaagaacgggatcgacggcgaactg
gcgatgaaaatctttgacctggtggagaaattcgccggttacggatttaacaagtcacac
tccgccgcgtatgcgctggtctcctatcagacgctatggctgaaggcgcactatcccgcc
gaatttatggcggcggttatgaccgccgatatggataacacggaaaaagtggtaggtctg
gtggacgaatgttggcggatggggctgaagatcctgccgccggacatcaattccggcctg
tatcactttcacgttaacgacgaaggtgagatcgtttacggtatcggggcgatcaaaggt
gttggtgaaggcccgattgaggcgatcatcgaggcgcgcaacaacggcggatacttccgc
gagctgttcgatctttgcgcccgtactgacaccaaaaaactgaaccgccgggtactggaa
aagttaattatgtccggggcgtttgaccgcctgggaccccaccgcgccgcgttgatgaat
tcgcttggcgatgcgttaaaggccgccgatcaacatgccaaagcggaagcgattggtcag
gccgatatgttcggcgtactggcggaagagccggaacaaattgaacagtcctacgccagc
tgccagccgtggccggaacaagtggtgctggatggcgagcgcgaaacgttgggtctgtac
ctgacggggcaccccatcaaccagtatttaaaagaaattgagcgctatgtcggaggctac
aggctgaaagacatgcatccgacagaacgtggtaaagtcaccacggctgcggggctcgtc
attgccgcaagggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttccggacgtcttgaagtcatgttatttaccgacgctctggataaataccagcaa
ctgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgcccgcgaagtgatggatattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggacaattccagtacatctctactatcag
agggcggatgcgcgcgcgcggttgcgttttggcgcgacgtggcgcgtttctccgagcgat
cgtttactcaacgatctccgtggcctcattggttcggagcaggtggaactggagtttgac
taa

DBGET integrated database retrieval system