Citrobacter sedlakii: JY391_18475
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Entry
JY391_18475 CDS
T07832
Name
(GenBank) hemagglutinin repeat-containing protein
KO
K15125
filamentous hemagglutinin
Organism
csed
Citrobacter sedlakii
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csed00536
]
JY391_18475
Glycosaminoglycan binding proteins [BR:
csed00536
]
Heparan sulfate / Heparin
Microbial pathogens
JY391_18475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg_2
Fil_haemagg
Glyco_hydro_20b
Motif
Other DBs
NCBI-ProteinID:
QUC29490
LinkDB
All DBs
Position
complement(3879706..3888444)
Genome browser
AA seq
2912 aa
AA seq
DB search
MNRQNVKAEKLNASNLHKKLGPLYLSLASILSPAVEAATTPDNRQSNGPTMGQTANGTPL
INIANPNAKGVSLNKFTEFNVDQKGVVFNNSMQEGVTKIGGYAVKNGQLQQEASAIISEV
TGAKASYINGTMEVFGKKADIIIANENGISVNGATTINANSLTLSTGKVQANQDGTYKLA
VDKGNITVTGQGINTEGLSYFDIVSRSAQLEGEIAGKADLKVLAGQNDYELASRSHTVRS
QGDGQGPAVAIDGSALGSMYGGKIQLISTESGAGVRHAGGIISSGDLEISADGDITLASL
HSDKNITLNGNNIATTKSSNSAMGVEAQNDIVFNALAGVTLNNDVISSAGKIRIDASSLV
QNAASLITNATATTSVPAIQINVAGQYTLNGKLQALDANGNIISNGVVTLKKGDFVVLVD
GKEVAFSSLVSDVQVISHSGDIQITAGSMTNNGGSVLAKKGTLQVNLTGAFESSGAVNAS
GNIVIASGTAKNNGVIYASGTQTLTVGDLDNSGRIFADKKLVMNASALNNKGVIGVTQGE
MQLASRGNLINSGTISSDDATIDVSAEGDIDNSGNIISNKNDVTVTAKGKSLKNTGTIEG
RSIALTTSDADATLENGGTVNAKQKVQVKTAKLSNAGGTLSSSGDMELKVSKQLANTSGG
EILAAGKLSLDGENVTTVVNDNAGWIQGKSVSLTNLASLSNTQDGVILATEDLTLTGINT
LTNDASTIQATTLLLDQIDTLNNVNTGTIYSGDSLQLSNIESLKNDNSQLIAEGALSLSH
LSDISNQNGAVVVSGTQLAINNVDSLTNSGGAVIQAGGALNITSVDTLNNVSDASIVASG
DMTFDGVRELTNQAVILSNSAITLQNGDTLKNEGVVQAGTDLIIRNIRNLINQGSDHVLM
ALRNLTIEDVDALTNADQAVITASMHTVLNAIGLLTNLSGSLIQAVDGTLTIAADTLTNS
GGTGEYASTLVAGGDLTIDANNLTNDDGGAIVSSDNNLTLNIAQGLNNTNSAVIVGGRTT
TLNVTNGDINNSADSLIAGYDITVNARAMANEDNSSIVADRDLTLKLASLNNTSGILEAG
RILSLDLDASLTLDNLSKNIRAGSELNISTQGDFTNNAMLEIIGDMNVDAEGDFVNNMSI
VTGGDLDINAKNVTNGAQSLLWTMGDLSLEARNGQFINAVGGNVLSMGDLSIIAKEIWNQ
AGIIRSEKNINLDAEVITNESTYSGDEISITGSQIATVSYETIEHAMTKSYTHIGLYMPT
VTSGLQLENQAEISAGGNININQRDIYDTHDVINTGGLIQAAKDITITGNVYNSPRYGEL
TLYDYLQLPLSKEGSITYRWELASEHQSSWEFDTLYQFLDFEFGGGSAANKIDTKGGGTD
AEKELWFNAVVMLGNQSTLFNSMMIRIFGENWQTSNYNKLCNIWAQQTASDNAGLKANKT
YYVPQEKGEITAGGNFTQNGGVLDNGIAGAGVINANANISDVDVGDYTVDTVIAGYDVNV
NTKTIDELSMGISPMPTIKDMISIPGMFEISTDFKKTTEAAKNGEDYPGPANNIVPIFET
RPSMIDQSGYTGSDYFFDQVGYDPQQPVNVIGDNYFTSELIRREISASVGSFFSIRDGLE
GDALVQALMDNAGEAAKDSELGLVVGEPLSQEQRSNLDKDIVWFVNQNVNGVDVLVPVVY
LCPETLRQMESGDVNGGSATIHAGNDMNVDASEINNMNGSISSGGDMTLVSDGDINNVSN
GMNSGISAGGDMSMTTTNGDINNNGAAISADGDIAMSAENGDITMTASVGRGEDGKQIIH
AYDDGVTAGGSISMEAKSITSNASDITAGQDVNMKATEGDVTFNDLHEIDATRTIDNDVQ
NAFNFSLSDTSTTTGTAIGSNVSAGGNMNIEAKNDVVMEGGTYSAQTGSISAENNVTIKT
SEDVSHSEEHTSSREFRMGAGVSGGGQTVETDYGTMSGGSNTTTTGDYVSAGSQSDTSAI
GKKPGRAPVNDTAGFSLEFNSQSDSTVTDSKKNTNASISFAESGSINANKTVDIGGADLS
AGDSLSINAEDVTSTKYLDEEKTTTTHKEMNFGISGEAHSTLADSADKAGNLVEKSQDGQ
ELNAGTTAAEVLGDASNLLLNDIAGASITIGGGSKKSTSTTETTSENITNINAKNISINT
KKDTTLNGVDIKGEEVEINAGGDVSMNAAKSTSSYSNSSEEHSGGVTAGVGVDLTGISGG
ASVDYSGNKENGSGDSTTYTNSTITADNVKIKTGGDMSMTGANIEANTADVDVAGDLDIT
SVQDTVHTENARQNWGASVGVAVSGKGVTPTAAVNAGGGSEAHDAATTAKQSGIHTNGEV
NVKTGGDLNMTGANIVSEEGTGSVNVAGDINARTLEDSVEQDGLYGGGGVGIGGVPGKKG
GVPSANLYVDTVDEIHRDETQKSTISVGDITSKGTTGEINTNKDEMSVVTRDEKEAGNNI
SFTLADPGIGKKNKGSYDLDTPDAPKNKGNGSTGEKKTDFTPGKPPRSEDVPAVTPQKSE
DLKPAPKPADSETKTDTTPSQTAHSEDVPAVTPQKADDLKPAPKPADSETKTDTTPSQTA
HSEDVPAVTPQKADDLKPAPKPADSETKSDTTPTPAAADTTTPTKKWPVPNTNYPTLSPG
SATGKTGMDTPKTPKHKQWNGDMTNGVAPSSGNGDSAKLSPGSSTGQTGMDTPKTPKHKQ
WNGDMTNGVAPSSGNGDSAKLSPGSSTGQTGMDMPKTPEHKQWNGDMTNGVAPSSGNGDS
AKLSPGSSTGQTGMDMPKTPEHKQWNGDMTNGVAPSSGNGDSAKLSPGSSTGQTGMDMPK
TPEHKQANGDMTNGVAPSSGDGSDVKLSPGSATGQTGMDMPKTPEHKQWNGDMSMSGVTR
HSDMPHWVPLMRETTIDAYATVIIQFDNSLLS
NT seq
8739 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgacaaaatgttaaagctgagaagttgaatgccagcaatttgcataaaaaactt
ggcccattatatctgtcattggcgagtattttatcgcctgccgttgaagcagccaccaca
ccggacaatcgtcaatcgaacggtcccacgatgggccagacggcgaatggcacgccgttg
attaatatcgctaaccctaatgcgaagggcgtttcattaaataaattcactgaatttaac
gttgaccagaaaggcgttgtctttaataacagcatgcaagaaggcgtgaccaaaattgga
ggttacgcggttaaaaatggtcaactgcagcaggaagccagtgcgattatcagcgaagtc
acaggtgcgaaggcctcgtatattaatggcacgatggaagttttcggtaaaaaagccgac
attattattgcgaacgaaaatggtattagcgtcaacggcgcgacgaccattaacgccaat
agtctgaccctcagcaccggtaaagtacaggcaaatcaggacggtacttataaacttgcc
gtcgataagggaaacatcaccgtcaccgggcagggtattaacactgaaggcttaagctat
tttgatatcgtcagccgcagcgcccagcttgaaggcgaaatcgccggtaaggcagacctg
aaggttttggccggacagaacgactatgagcttgccagccgtagccataccgttcgtagc
cagggcgatgggcaggggcctgctgttgctatcgatggtagcgcgctgggttccatgtac
ggcggtaaaattcagttaatcagcaccgaatctggcgcgggtgtgcgccacgcaggtggt
attatttccagcggtgatttagagattagcgccgacggggatatcacgctggccagtctg
cacagcgataaaaatattacgctaaacggcaacaatattgcgaccaccaaatccagcaat
agcgcgatgggcgttgaagcgcaaaatgacattgtgtttaatgcgcttgctggcgttacc
ctcaataacgatgtgatttcctctgcgggtaagatccgtattgacgccagttcgctggtg
caaaatgccgcctcgctgatcaccaacgcgacggcgacgacctctgtaccagccatccag
atcaacgttgccggacaatatacgctgaatggcaaactccaggcgctggatgcaaatggc
aatatcatcagcaatggcgttgtgacgctgaaaaagggtgacttcgtcgtcctggtggac
ggcaaggaagtcgcgttcagctcactggtatcggatgttcaggttatcagccacagcgga
gatattcagattaccgctggcagtatgaccaataacggcggctctgtactggcgaaaaaa
ggcactttgcaggttaatctgactggcgcgtttgaaagcagcggtgccgttaacgccagc
ggcaatatcgttatcgcttccggaacggcgaaaaataatggcgtgatctatgcgtctggc
acccagacgctcaccgttggcgacctggataacagcggccgaatctttgccgataaaaaa
ctggtgatgaatgccagcgccctcaataacaaaggggtaatcggcgtcacgcaaggggaa
atgcagcttgccagccgcggaaaccttatcaatagcggtacgatcagtagcgacgatgca
accatcgatgtaagtgctgaaggcgatatcgacaacagcggcaatatcatcagcaataaa
aatgacgttaccgtcactgcgaaaggcaagtcgctgaaaaataccggcaccattgaaggc
cgcagcatcgcgctaacgacttctgatgcagatgccactcttgaaaacggcggcaccgtg
aatgctaaacagaaagttcaggtgaagaccgcgaagctaagcaatgctggcggtacgctc
agttcgtcgggcgatatggaattgaaggtgagcaagcagctcgccaacaccagcggcggt
gaaattctggcggcgggtaaactgtcactggatggcgaaaacgtgacgacagtggtgaat
gacaatgccggttggatccagggcaagtccgtttcgttgaccaatcttgcgtcgctttct
aatacccaggatggggttatcttagccacggaagatcttacgcttaccggtattaatacg
ctgacgaatgacgcatcgacaattcaggcgacgacactcctgctcgatcagattgatacg
cttaataacgtcaataccgggacaatctacagcggtgatagcctgcaattgtcgaatatt
gaatcccttaaaaacgataattcccagctgattgccgaaggcgctctttcactcagccat
ctgtccgacatttcaaaccagaatggcgcggtggtggtcagtggcacacagcttgccatt
aacaatgttgattcattaaccaacagcggtggcgcggtgattcaggcaggtggcgcgctc
aatataacttccgttgatacgctgaataacgtttccgacgcttccattgtggcgtcaggc
gatatgacgtttgacggcgttcgggaactgactaaccaggctgtcatccttagcaacagt
gcgatcaccctgcaaaatggcgatacgcttaaaaatgaaggtgttgtacaggccggaacc
gatctgattatccgcaatatcagaaacctgattaaccaggggagcgaccatgtgttaatg
gccttgcgtaacctgacgattgaagatgtggatgccctgaccaacgccgaccaggccgtg
attacagcaagtatgcatactgtactcaatgcgatcggtctgctgacgaacctgtcaggt
tccttgattcaggcggttgacggtacgctgactatcgccgcggataccttgaccaacagc
ggcggcacgggggaatacgcatcaactctggtcgcgggcggcgacctgactatcgatgct
aataatctgacgaatgatgatggcggcgctattgtctcgtctgataataacctgacgctg
aatattgcgcagggtttaaataacacaaattcggcggtaatcgtcggtggccgaaccacc
acgctgaacgtgacgaacggtgatattaacaacagcgctgattcgcttatcgccggttat
gatattaccgtcaacgccagggctatggcgaatgaagacaactcgtctattgttgccgat
cgcgatctgacgctcaaactggccagcctgaataatacctctggtattctggaagccggg
cggattttgtctcttgatctcgacgccagtttgactcttgacaatctcagtaaaaacatt
cgggcaggaagtgagctgaacatttcgacgcagggtgattttacgaacaatgccatgctg
gaaatcatcggcgatatgaacgtggacgccgaaggcgacttcgtcaataacatgtctatc
gtcaccggcggtgatttagatattaatgcgaagaatgtgactaatggcgcgcaaagtctg
ctgtggacaatgggcgatttgagtcttgaagcgcgcaacggacagtttatcaatgccgtt
ggcggtaatgtgcttagcatgggtgatttgtcgattatcgcgaaagaaatctggaaccag
gcggggataatccggtcagaaaaaaatattaatcttgatgctgaagtcattaccaatgaa
agcacctacagcggtgatgaaatttcaatcactggctcgcagattgcaactgtatcgtat
gagacgatcgaacatgcaatgacgaaatcttatacgcatattgggttatatatgccgacc
gtcacatccggtctgcaactggaaaaccaggcggagatcagcgcaggtggcaatatcaat
atcaaccagcgtgatatttacgatacccacgatgtgattaataccggtggtctgatacag
gcggcgaaagatatcaccatcacaggtaacgtctataactcgccgcgctatggcgaactt
acgctttacgattacttgcaacttccgctcagcaaggaaggctccattacctatcgctgg
gagcttgcatcagagcaccagtcgagctgggaattcgatacgctttatcaattccttgac
tttgaatttggcgggggcagtgcggcaaacaaaattgacacaaaagggggcggcactgat
gcggaaaaagagctctggtttaatgcagtagtgatgttaggtaatcaatcaacattattt
aacagcatgatgatccgaattttcggcgaaaactggcaaacgtctaattataacaaattg
tgtaatatttgggcgcaacaaaccgcatcagacaatgcagggttgaaggccaataaaacc
tattatgtgccgcaggaaaaaggcgaaattaccgctggcggcaacttcacgcagaatggt
ggggtgctggataatggtattgccggggcaggggtgattaacgccaacgccaatatcagc
gatgttgatgtaggtgattataccgttgacaccgttattgcgggctatgatgtcaacgtc
aataccaaaactattgatgagctgtccatgggtatcagccccatgccgaccatcaaagat
atgatctcgatcccgggaatgtttgaaatctccaccgatttcaagaaaaccacagaagcg
gcgaaaaatggcgaggattatccgggacccgctaacaatatcgtgccgatttttgaaacc
cgtccatcgatgatagaccagagcggttataccggatcggactatttctttgatcaggtg
gggtacgatccgcaacagccggtcaatgtgatcggcgataattattttacctctgagctg
attcgccgcgaaatttccgcctcggttggcagcttcttctcaattcgcgacggcctggag
ggcgatgcgcttgtccaggcattaatggataacgcaggtgaagcggcgaaggatagtgag
cttggcctggtggttggcgaaccgttgtctcaggagcagcgtagcaatctggataaagat
atcgtctggtttgttaaccaaaatgtaaacggtgtggatgtattggttccggttgtttat
ctgtgcccggaaacgctgcgtcagatggaaagcggcgacgttaacggcggcagcgcgaca
atccatgctggtaatgacatgaacgttgatgccagtgaaatcaacaatatgaatggctca
atttcgtctggcggcgacatgacgttggtctctgacggcgatattaataacgtcagtaac
ggtatgaactccggtatttccgcgggtggcgatatgagcatgacgaccaccaatggcgat
atcaacaataatggcgcggctatcagtgccgacggtgatattgcgatgagcgctgaaaat
ggcgatatcaccatgacggcaagcgtgggtcggggtgaagatggcaagcagattattcat
gcctacgacgatggcgtgactgctggcggtagcatcagcatggaagcgaaatcaatcacc
tcaaacgcgtcagatattaccgcgggtcaggatgtcaatatgaaggccacagagggggac
gtgaccttcaacgacctgcatgaaattgatgcgacccgcaccattgataacgatgtgcaa
aatgcctttaatttctcgttatcggatacctccaccacgacgggcaccgctattggcagt
aatgtgtcggctggcgggaatatgaacattgaggctaaaaatgatgttgtgatggaaggc
ggcacctattctgcgcagaccggctcgatctcggcagaaaacaatgtcacgattaaaacc
tcagaggatgtctctcattcggaagagcacacctccagccgcgaattccgtatgggggct
ggggtcagcggtggtggtcagacagtggaaacggactatggcacgatgtcgggtgggtct
aatacaaccacgacaggcgattacgttagtgccggttcacaatccgatacgtcggctatc
ggtaaaaagcctggacgcgcgccggtaaacgataccgcgggtttcagtctcgaatttaat
tctcaaagtgattctaccgttactgacagtaaaaagaatacgaatgcctcaatcagtttt
gccgagtcgggatcgatcaacgccaataaaaccgtggatatcggtggggctgacctgagc
gcgggcgactctctgagtattaatgcagaagatgtcaccagcactaaatacctcgatgaa
gagaagaccaccaccacgcataaagagatgaatttcggtatttctggcgaagcgcacagt
acccttgccgattccgccgataaggccggtaacctggtcgagaaatcgcaggatggccag
gagcttaatgcggggaccacagccgcagaagtgcttggcgatgcgtcgaatttgttactt
aacgatattgcgggcgcgtccataacgattggcggcggttcgaagaaatcgacatccact
accgaaacgacgtcggaaaatatcaccaacattaatgcgaaaaatatctctatcaatact
aaaaaagacaccaccctcaatggtgtcgatattaagggcgaggaggtagaaattaacgcc
ggtggcgacgtgtcgatgaatgcggcgaaatcgacttccagctattccaactccagcgaa
gaacattctggaggggtcacggcaggcgttggtgtggatctgaccggaatcagcggcggt
gcgtccgttgactacagcggtaataaagaaaatggttccggtgactctaccacctacacc
aacagtactattaccgccgataacgtgaagatcaaaaccggcggcgatatgtccatgact
ggggcaaatatcgaggccaataccgcggatgtcgacgtggcaggggatctggatattacc
tccgtccaggatacggttcataccgaaaatgcccgacagaactggggggcgtcggtgggt
gtcgccgtatcgggtaaaggggttacgcctaccgctgcggtaaacgcgggtggtggctcc
gaagcgcatgacgcagcgaccacggcaaaacaatctggcattcacacgaatggcgaagtg
aacgtgaaaaccggcggcgacctgaacatgacaggggcgaatattgtctctgaagagggt
accggttccgtgaacgtggctggcgacattaacgcccggacccttgaagacagtgtggaa
caggatggtctgtacggtggcggtggtgtgggtatcggtggcgtgccgggcaagaaaggc
ggcgtgccatcggcaaacctttatgttgatacggttgatgaaattcatcgtgatgaaacg
caaaaatcgaccatttccgttggtgatatcaccagtaaaggcacgaccggcgagatcaat
accaataaagacgaaatgtctgtcgtcacgcgtgatgagaaggaagcaggcaacaatatc
tcctttacgctggccgatccgggcatcggtaagaaaaataaaggcagctatgaccttgat
acgccagatgcgcctaagaacaaaggcaacggtagcaccggcgagaaaaagacagatttc
actccgggcaaaccgccgcgtagcgaagacgttccggccgtcacgccgcagaagtcagag
gatctgaaaccggcgccgaaaccggcagacagcgaaacgaagacggataccacgccgtcg
cagaccgcgcacagtgaagacgttccggccgtcacgccgcagaaggcagacgatctgaaa
ccggcgccgaaaccggcagacagcgaaacgaagacggataccacgccgtcgcagaccgcg
cacagtgaagacgttccggccgtcacgccgcagaaagcagacgatctgaaaccggcgccg
aaaccggcagacagcgaaacgaaatcggacaccacgccgacgccagccgcggctgatact
acgacgccgactaagaaatggcctgttccgaatacgaactacccgacgctgtctccaggt
tccgcaaccggcaaaaccggaatggacacgccgaagacgccgaagcacaagcagtggaac
ggtgacatgaccaacggcgtggcgccatcttccggcaacggcgacagtgccaagctgtcc
ccgggatcgtctaccggtcagaccggaatggacacgccgaagacgccgaagcacaagcag
tggaacggtgacatgaccaacggcgtggcgccatcttccggcaacggcgacagtgccaag
ctgtccccaggatcgtctaccggtcagaccggaatggatatgccgaaaacgccggagcac
aagcagtggaacggtgacatgaccaacggcgtggcgccgtcttccggcaacggcgacagc
gcgaagctatcaccgggatcgtctaccggtcagaccgggatggacatgccgaaaacaccg
gagcacaagcagtggaacggtgacatgaccaacggcgtggcgccgtcttccggcaacggc
gacagcgcgaagctatcaccgggatcgtctaccggtcagaccggtatggacatgccgaaa
acaccggagcacaagcaggcgaacggtgacatgaccaacggcgtggcgccgtcttccggt
gatggcagtgacgtgaagctttctcctgggtctgcaaccggtcagacgggtatggacatg
ccgaaaacgccggaacacaagcagtggaatggcgacatgagcatgtccggcgtcacgcgc
catagcgacatgccgcactgggtacctctgatgcgtgaaaccaccatcgacgcctacgca
actgtcatcattcaatttgataactcgctcttgagctaa
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