KEGG   Citrobacter sedlakii: JY391_18740
Entry
JY391_18740       CDS       T07832                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
csed  Citrobacter sedlakii
Brite
KEGG Orthology (KO) [BR:csed00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csed03400]
    JY391_18740
Enzymes [BR:csed01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     JY391_18740
    5.6.2.6  RNA 3'-5' helicase
     JY391_18740
DNA repair and recombination proteins [BR:csed03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    JY391_18740
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QUC29536
LinkDB
Position
3942593..3944788
AA seq 731 aa
MTNEYQRLDPRIQKWIYRQGWADLRELQKKAVPPILAGDRDVLISAATAAGKTEAFFLPA
CSTIADIQGGFGILYISPLKALINDQYRRLESLGDALEMPVTPWHGDVAQSKKLKAKKNP
AGILLITPESLEAMLIRNAGWLKEAFAPLAYIAIDEFHAFIGSERGMQLLSLLNRIDHLL
GRTNNPVPRVALSATLGELERVPLSLRPNQCLPCDIITDSQTHATLKVQVKGYLEPLTTS
GQQPPPSAETQICHDIFRLCRGDSHLVFANSRKQTESIAATLGDLSEANIVPNEFFPHHG
SLSRDLRETLEQRLQQGNLPTTAICTMTLELGIDIGKVSSVVQVTAPHSVASLRQRMGRS
GRRDSPAVLRMLIAEHELTPTSGIVDQLRLQLVQSLAMIRLLISSKWFEPADTRQMHYST
LFHQILAIVAQWGGVRADQIWSQLCQQGPFQKVRIDDFKTLLKHMGEHHFLTQLSSGELV
LGVEGERQVNQYTFYAVFSTPEEFRIVAGSKTLGSIPVDSPLMPDQHIIFGGRRWKVTDI
DSDKKVIYVEATKGGQPPLFGGQGMSIHDVVRQEMLTIYREGDYRITVGERKADFADTTA
RYLFDEGLHCFRNNNLASECFIQQGQHVYILPWLGDQTVNTLSALLIQRGFKAGSFAGVV
EVEKTTVAEVKQTLASALQDGLPSESRLAESIAEKCLEKYDEYLPEVLLTLEYGLRAFNV
ESVAQWLRGHL
NT seq 2196 nt   +upstreamnt  +downstreamnt
atgacgaacgaataccagcggctggatccacgcatacagaagtggatatatcggcaggga
tgggccgatctccgggaactgcaaaaaaaagccgttccaccgatattagcgggcgatcgg
gatgtcctgatcagcgccgcgactgctgcgggtaaaacggaagcttttttcctgcccgcc
tgttctaccattgcggatattcagggcggttttggcattttatacattagcccacttaag
gccctgattaacgatcagtatcgacggctggaaagcctcggcgatgcgctggagatgccg
gtcacaccctggcatggcgacgttgcgcagagcaaaaagctgaaagcgaagaaaaaccct
gccggtattctgcttatcaccccggagtcgctggaagcgatgctgatccgcaacgcggga
tggttaaaggaggctttcgctccactggcatatatcgccattgatgaattccacgccttc
atcggttctgagcggggtatgcagcttctctctctgttaaatcgaatcgatcacctgctg
ggaagaaccaacaatccagttccccgagtcgcactcagcgcaacgctgggagaactggaa
cgggtgccgttatctctgcggccaaatcaatgtctgccctgcgacattattaccgacagc
caaactcacgccacgctaaaagtacaggtgaaaggttatctggaaccgctgaccacctcg
ggccagcaacctccaccgtcggcagaaacgcaaatctgccatgatatatttcgcctttgt
cgcggtgattcccatctggtgttcgctaatagccgcaaacagaccgaaagcattgccgct
acgctaggggatctcagtgaagcgaacatcgttcccaatgaattcttcccccatcacgga
tcgctgtcccgagatctgcgtgaaacgctggaacagaggcttcaacaaggcaacttacct
accaccgccatctgtacgatgacgctggaacttggcatcgacatcggcaaagtcagctcc
gtcgtgcaggttaccgcacctcattccgtcgccagcctgcgccagcgtatggggcgttct
ggtcggcgcgactcgcctgccgtattgaggatgctgattgccgaacatgaactgacgccg
acatcaggcattgtcgaccagctcaggcttcagctcgttcagtcgctggccatgatccgc
ttacttatcagcagcaaatggtttgagcccgccgatacccggcagatgcactattccacc
ctgttccatcagattctggcgatcgtggcgcagtggggaggcgtgcgtgccgatcagatc
tggtcacagctatgtcaacaaggaccatttcagaaagtccgaatcgacgacttcaaaacg
ttattgaagcatatgggggagcaccactttctgacccagctatcaagcggcgaactggtt
ctgggcgtcgagggtgagcgccaagtgaatcagtataccttctacgccgtattcagcaca
ccggaagagtttcgcattgtggcgggaagtaagacactcggctccatccctgtagattct
ccactgatgcctgaccaacacattattttcggcggtcgacgctggaaggtaaccgatatc
gatagtgataaaaaagtcatctatgtcgaggcgacaaagggtgggcagccgccgttattt
ggcggacaagggatgtccattcatgatgttgtccgtcaggaaatgctcaccatttatcgg
gaaggcgactaccgtatcaccgttggcgagcgcaaagccgattttgccgataccacggcc
agatacctgtttgatgaagggctacactgttttcgcaacaataatctggcttcggaatgt
tttattcagcaggggcagcatgtctacattcttccctggctgggcgatcaaaccgtaaac
acgctatcagcattgcttatccagcgcggtttcaaggcgggctcatttgctggtgtggtt
gaagtggaaaaaaccacggtagcggaagttaagcagacgttagccagcgcacttcaggac
ggtttgccctccgaatcccgtcttgccgaaagcatcgctgaaaagtgcctcgaaaaatat
gatgagtatttaccggaggtgttgctgacgctggagtatgggttacgtgcttttaatgtt
gagagcgtggcgcagtggctacggggacatttgtag

DBGET integrated database retrieval system