Citrobacter sedlakii: JY391_19390
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Entry
JY391_19390 CDS
T07832
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
csed
Citrobacter sedlakii
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csed03400
]
JY391_19390
DNA repair and recombination proteins [BR:
csed03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
JY391_19390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
TrwB_AAD_bind
ResIII
AAA_16
FtsK_SpoIIIE
SLFN-g3_helicase
AAA
AAA_30
T2SSE
AAA_7
AAA_18
AAA_25
AAA_19
Hydrolase
AAA_28
CbiA
Smg4_UPF3
SRP54
nSTAND3
AAA_6
NTPase_1
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
QUC29649
LinkDB
All DBs
Position
4086162..4087664
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AA seq
500 aa
AA seq
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MSAPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSGIGVPVFMADVK
GDLTGVAQEGQASEKLLARLQNIGVSDWQPHNNPVVLWDIFGEKGHPVRATISDLGPLLL
ARLLNLNEVQSGVLNIIFRIADDQGFLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASI
GAIQRGLLTLEQQGANHFFGEPMLDIKDWMRTDASGKGIINILSAEKLYQMPKLYAASLL
WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPEVLLDKIEQVIRLIRSKGVGVWFV
SQNPADIPDNVLGQLGNRVQHALRAFTPKDQKAVKTAAQTMRANPAFDTEKAIQELGTGE
ALISFLDAKGSPSVVERAMVIAPCSRMGPVTDDERNGLINHSSLYGKYEEERDRESAFEL
LQKGVQAATEEQNAPAAKGKEVAVDDGILGGLKDILFGSTGPRGGKRDGVVQSVAKSAAR
QVTNQIIRGMLGSLLGGRKR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcacccttgttaattgcccgcacgccggacaccgaactgtttttactgccaggc
atggcgaaccgtcacggcctgattaccggggcgacagggacagggaaaaccgtcacgctg
caaaagctcgccgagtcgctatccggcatcggcgtaccggtatttatggcggatgttaaa
ggcgatctcaccggggtggctcaggaaggacaagcctctgagaagttgcttgccaggctg
caaaacatcggcgtcagcgactggcagccgcataataacccggtggtgctgtgggatatc
tttggcgagaagggacatccggtacgcgccacgatctcggacctcggaccgctactactg
gcgcgcctgctgaatctcaatgaggtgcagtccggcgtgctgaacatcatcttccgcatt
gccgacgatcagggatttttactgctcgattttaaagacctgcgggcgattacccaatat
atcggcgataacgcgaaatccttccagaatcagtatggcaatatcagcagcgcttccatc
ggcgcgatccagcgcggcctgttgactttagaacaacagggggcgaaccatttcttcggc
gagccgatgctcgacatcaaagactggatgcgcaccgatgccagcggtaaagggatcatc
aatatccttagcgccgaaaaactctaccagatgccgaaactctatgccgccagcctgctg
tggatgctctctgagctttacgagcaactgccggaggcgggcgatctggaaaaaccgaag
ctggtgttctttttcgacgaagcgcatttgctgttcaacgatgcgccagaggtgctgctg
gataaaatcgaacaggtgatccgcctcatccgttcgaagggcgttggcgtctggttcgtc
tcacagaatcccgctgatatcccggataacgtgctcggtcaactgggcaatcgtgtccag
cacgccctgcgggcctttacgccgaaagatcaaaaagcggtgaaaaccgccgcgcaaacc
atgcgcgccaatccagcgttcgacacggaaaaagccattcaggaactgggcaccggcgaa
gcgctgatctccttcctggatgccaaaggtagtccatcggtggtggagcgggcaatggtg
attgccccctgctcgcgtatggggccagttactgacgacgagcgcaacgggctgataaac
cactcttcactctatggaaaatatgaagaagaacgggatcgcgaatcggcgtttgagttg
ctgcaaaagggtgttcaggccgcgactgaagagcaaaacgcgcctgcagcgaaaggcaaa
gaagtagcggttgacgatggtatcctgggcgggttgaaggatattttgtttggcagcacc
ggtccgcgcggcggcaagcgcgacggcgtggtacaaagcgtagcgaaaagcgcagcgcga
caggttaccaatcagatcattcgcgggatgctgggaagcctgttgggcggcagaaagcgt
tag
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