KEGG   Citrobacter sedlakii: JY391_20140
Entry
JY391_20140       CDS       T07832                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
csed  Citrobacter sedlakii
Pathway
csed03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:csed00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JY391_20140 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:csed02044]
    JY391_20140 (tssM)
Secretion system [BR:csed02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JY391_20140 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical AAA_16 AAA_22 nSTAND_NTPase5 Hydrolase
Other DBs
NCBI-ProteinID: QUC32441
LinkDB
Position
complement(4240637..4244098)
AA seq 1153 aa
MPRFKVSAFWLLMLAWIVLLVWIWWKGPSWSLYGEQWLKPLANRWLATAAWGIIALGWLT
VRVMKRLQQLEKQQKQQREEAQDPLSVELNAQQRYLDRWLLRLQRHLDNRRYLWQLPWYM
VIGPAGSGKTALLREGFPSDVIYTPETARGAEQRVYLTPHVGKQAVIFDIDGVLCEQPDA
DVLHRRLWEHVLDWLVEKRARQPLNGIIITLDLLDLLTADKRRREHLLQTLRSRLQDVRQ
HLHCQLPVYVVLTRLDLLHGFAALFQSLDKKDRDTILGVTFTRRAHENEDWRAELDAFWL
TWCDRMNHAMLDLMLTQTHMRSSLFSFSRQIQGSRDFLAALLDSLLDGENMDVMLRGVYL
TSSLQRGQMDDLFTQSAARQYRLDGSPLSAWPLVDTVSYFTRNLFPQALLAEPNLAGESR
AWLISSRRRLTAFSAVGGVTALLLITGWHHYYGVNYASGVQVLKQAEAFMSIQPPQGMDE
YGNLQLPLLNPVRDATLAYGDWGDRSRLADMGLYQGRRIGPYVEQTYLQLLEQRYLPALF
NGLVKELNAAPPESEEKLAVLRVMRMLEDKSGRSNEVVKQYMAKRWSEKFHGQRDIQTQL
MSHLDYALKHTDWHAERAAGDGDAISRWTPYDSPVAVAQKELSKLPVYQRVYQSLKTRAL
GVLPADLNLRDQVGPTFDQVFISSDDNKLIVPQFLTRYGLQSYFVRQRDALITLTAMDSW
VLNVTHSVKYSEADRAEIQRQLTEQYISDYTATWRAGMDNLNVRDYESIVQLTRALEQII
SGDQPLQRALTALRDNTRPAVLPEKLSDKEREEAQEEPDYRLLTRLGHEFASENSVLAVQ
NNKENTLQAVYQQLTELHRYLLAIQNAPVPGKSALKAVQLRLDQNSSDPIFTTRQMAKTL
PAPLNRWVGKLADQAWHVVMVEAVHYMEIDWRDNVVKPFNEQLANNYPFNQRSSQDASLD
AFERFFKQDGVLDTFYQQNLKLFIENDLSRDGDDGVIIREDVIRQLDTAQKIRDIFFSKQ
NGLGTQFAVETVSLSGNKRRSVLNLDGQLVDYSQGRNYTAHLVWPNNMREGNESKLTLVS
VSGGAPRSISFSGPWAQFRLFGAGQLTSVKEGSFSVRFNVDGGAMVYRIHADTEDNPFSG
GLFSHFRLPDTLY
NT seq 3462 nt   +upstreamnt  +downstreamnt
atgccacggtttaaggtctctgcgttctggctgctgatgctggcatggattgtgctgctg
gtatggatctggtggaaaggtccgtcatggtcgctgtacggcgaacagtggcttaaaccg
ctggcgaaccgctggctggcgacggcggcctgggggattatcgccctgggatggctgacc
gtccgggtgatgaaacgcctgcaacagcttgagaaacaacaaaaacagcagcgagaggaa
gcgcaggacccgctgagcgtcgagctgaatgcgcaacagcgttacctcgaccggtggctg
ctgcgactgcaacgccatctcgataaccgtcgttacctgtggcaactgccgtggtatatg
gtcatcggccctgccggaagcggtaaaaccgcactgttacgggaaggttttccatccgat
gttatttatacgccggaaactgcgcgcggcgcagaacaacgtgtgtacctgacgccgcat
gttggcaaacaggcggtgatttttgatattgacggcgtactctgtgaacagccggatgct
gatgtcctgcaccgccggttatgggagcacgttctggactggctggtggaaaaacgcgcc
cgccagccactgaacgggatcattatcacacttgacttactcgacctgttgacggctgac
aaacgccgccgcgaacatctgttgcagacgctgcgcagccgtttacaggatgtgcgccag
caccttcactgccagttgccggtttatgtggtactgacccgactggatttattacacggc
tttgccgccctgtttcagtcactggataaaaaagatcgcgatacgattttaggcgtgacc
ttcacccgccgcgcccatgaaaacgaggactggcgcgcagagctggatgctttctggctg
acatggtgtgatcgaatgaaccatgccatgctggatctgatgctcacacagacgcatatg
cgaagttccctgttcagtttttcccgccagatacaggggagccgggacttcctggcggcc
ctgcttgacagcctgctggatggtgaaaatatggatgtgatgctgcgcggcgtatacctt
acttcgtcgctgcaacgggggcagatggatgatctttttacgcagtctgccgcccggcag
taccggctggacggcagtccactgagcgcctggccgctggtggatactgtatcttacttt
acccgcaatctgtttccacaggcactgctggccgagccgaatctggccggagaaagccgt
gcctggctgataagcagccgccgccgtctgacggccttttccgccgtgggtggggtgacc
gcattactgttaatcaccggctggcatcattactacggggttaactacgcctccggcgtc
caggtgctgaaacaggctgaagcctttatgtctatacaaccgccacaggggatggatgaa
tacggtaatctgcaactgccattacttaatccggttcgtgacgccacgcttgcttatggc
gactggggcgatcgcagccgactggccgatatggggctgtatcagggcaggcgtatcgga
ccttatgtggaacaaacctatctacaactccttgagcaacgctaccttccggcgcttttt
aatggcctggtgaaagaactgaatgccgccccgccggagagcgaagaaaaactcgccgtg
ttgcgtgtcatgagaatgttggaagataagagcgggcgtagtaatgaggtagtaaagcag
tatatggcaaagcgctggagtgaaaaatttcacggccagcgggatatccagacgcagctg
atgtcgcacctcgactatgccctgaagcataccgactggcacgcagagcgggcagcaggc
gatggtgacgccatcagccgctggacgccgtatgacagtccggtggcggtagcgcagaaa
gagttaagcaagttgccggtttaccagcgcgtctaccagagtctgaaaacacgggcgctg
ggcgttctgcccgccgatctgaacctgcgcgatcaggtgggtccgacattcgatcaggtc
tttatttcctcagatgataataaactgattgttccacagtttcttacccgctatggcctg
caaagctatttcgtcagacagcgtgatgcgttgattacgctgacggcaatggactcttgg
gtactgaacgttactcacagtgtgaaatacagcgaggctgatcgtgctgaaatccagcgc
caactgacagagcagtatatcagtgactacaccgccacctggcgggcggggatggataat
ctcaacgtgcgcgactatgaatccatagtccaattgacccgtgcactcgagcagattatc
agtggcgaccagcccttacagcgggcgctgacggcgttgcgggacaacacgcggcccgcg
gttctcccggaaaaactctctgataaagagcgtgaagaggcacaggaagagccggattac
cgtttgctgacgcgcctcggacacgagttcgcatcagaaaacagcgtactggcagtgcag
aataataaagaaaataccctacaggcggtgtatcaacagttgaccgaactgcaccgttac
ctgctggctatccagaatgcgccggtgccgggaaaatcggccctgaaagccgtccagtta
cgtcttgatcagaacagcagcgacccgatatttactacccgtcagatggcgaaaacactg
ccagcgccgcttaatcgctgggtgggaaaactggcagatcaggcctggcatgtggtgatg
gtggaagccgttcattatatggagattgactggcgtgacaacgtagtgaaaccttttaac
gagcaactggcaaataactacccattcaaccagcgttcatcgcaggatgcgtcactggat
gcatttgaacgtttctttaaacaggatggcgtgctggacaccttttatcagcagaacctg
aaactgtttattgaaaatgacctgagtcgtgacggggatgacggtgtgattatccgtgag
gatgtcatccggcaactggataccgcacagaaaatccgcgacatcttcttcagtaaacaa
aatggcctgggaacgcagttcgcggtagagaccgtttcgctttccggtaacaagcgccgt
agcgtgctgaaccttgacggccagttagtcgattacagtcaggggcgtaactacaccgct
catctggtctggccgaataacatgcgcgaaggcaatgaaagcaagctgacgctggttagc
gtcagtggtggtgcaccgcgcagcatcagcttcagtgggccgtgggcgcagttccgcctg
ttcggggctggacagctaaccagcgtgaaagaggggtcattcagtgtgcgctttaacgtg
gacggtggcgcgatggtctaccggatacacgcggataccgaagacaatccgttcagtggc
gggctgttcagccatttccggctgccggatacgctgtactga

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