KEGG   Citrobacter sedlakii: JY391_20155
Entry
JY391_20155       CDS       T07832                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
csed  Citrobacter sedlakii
Pathway
csed03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:csed00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    JY391_20155 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:csed02044]
    JY391_20155 (tssH)
Secretion system [BR:csed02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   JY391_20155 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_16 AAA_5 ClpB_D2-small AAA_22 NACHT TniB AAA_7 NBD_SMAX1 AAA_25 RsgA_GTPase AAA_14 AAA_24 Rad17 AAA_6
Other DBs
NCBI-ProteinID: QUC29790
LinkDB
Position
complement(4246349..4249147)
AA seq 932 aa
MIQINLASLVKHLNPFSRQALEAAAAECMSQQATEITVAHVLLQMLAAVRSDVRVIADQA
EIDTHALRRALTVENYTTARSTDSYPAFSPMLVEWLKEGWLLASAEMQHRELRGGALLLA
LLHSPLRYVPSAAARLLTGINRDRLQQDFAEWTRESAESVVSDAGGQAVGVTTDTGDTLL
GRYAKNMTADARNGKLDPVLCRDNEIDLMIDILCRRRKNNPVVVGEAGVGKSALIEGLAL
RIVAGQVPDKLRDTDIMTLDLGALQAGASVKGEFEKRFKGLMVEVIQSPRPVILFIDEAH
MLIGAGNQQGGLDISNLLKPVLARGELKTIAATTWSEYKKYFEKDAALSRRFQLVKVSEP
TAAEATVILRGLSAVYEQSHGVLIDDEALQAAATLSERYLSGRQLPDKAIDVLDTACARV
AINLSSPPKQISALTTLSHQCEAEIRQLEREIRIGLRTDTSRLTEAIVQYDETLTELDEL
EAAWHLQQTLVQEIIALRKGLLDEQDATDNDKTATPEAEITDSDATTVDDPVTEVTNIES
VTADEAEQGYSEPAIIPTERLAQLTAELNALHRTQLLVSPHVDKKQIAAVIAEWTGVPLN
RLSQNEMSVITDLPQWLGNTIKGQDLAIQHLHKHLLTARADLRRPGRPLGAFLLAGPSGV
GKTETVLQLADLLYGGRQYLTTINMSEFQEKHTVSRLIGSPPGYVGYGEGGVLTEAIRQK
PYSVVLLDEVEKAHPDVLNLFYQAFDKGEMADGEGRLIDCKNIVFFLTSNLGYQVIVEHA
DHPELMQEELYPVLADFFKPALLARMEVVPYLPLSKETLSVIIAGKLARLDNVLRTRFNA
EVVIEPAVTDEIMQRVTRAENGARMLESVIDGEMLPPLSLLLLQKMAANTAVARIVLGVA
DGAFIADVEDAPDDAAADDMQPEQEAEDIAAL
NT seq 2799 nt   +upstreamnt  +downstreamnt
atgatccagattaatctggcctctctggttaagcatcttaacccattttcccggcaggcg
ctggaagctgctgcggcagaatgcatgagtcagcaggcaacagaaatcaccgtggcgcat
gtgctgttgcagatgctggcagcggtgcgcagcgacgtgagagtgattgctgaccaggct
gaaatcgatacgcatgcgcttcgccgggcgctgacggtggaaaattacacgacggcgcgt
tcgacagacagctacccggcattttcgccgatgctggtcgagtggctgaaagagggctgg
ctgctggcctctgccgaaatgcagcaccgcgagctgcgcggtggcgcactgttgttggcc
ctgctgcattcaccgttgcgctatgtcccgtctgctgccgcacggttgctcaccggtatt
aaccgcgatcgactgcaacaggacttcgccgagtggacgcgggagtcggcggagtcagtt
gtgtcggatgctggtggacaggccgttggagtcacaacagataccggtgacactctgctc
ggccgttatgccaaaaatatgaccgcagacgcccgtaatggcaaactcgatccggtcctg
tgccgcgacaatgaaatcgacctgatgatcgacatcctctgccgccgccgtaaaaacaat
ccggtagtggtcggtgaggccggtgtcggtaaaagtgcgctgatcgaagggctggcgctg
cgcattgtcgcaggtcaggtgccagacaaactgcgcgacaccgacattatgacgctggat
cttggcgcattgcaggcaggcgcatcggtgaaaggcgagtttgagaagcgctttaaagga
ttgatggtggaagtcattcagtcgcccagacccgtcattctgtttatcgacgaagcccat
atgctgattggcgcgggcaaccagcagggcgggctggatatctccaacctgctcaaaccg
gtactggcgcgcggcgagctgaaaaccatcgccgccaccacctggagtgaatacaagaaa
tatttcgagaaagacgccgccctgtcgcgccgtttccagttggtgaaggtcagcgaaccc
acggcggcggaagccaccgttatcctgcgcgggctgtcggcggtgtatgagcagtcccac
ggcgtactgattgatgatgaggcgttacaggctgcggcaacgttaagtgagcgctatctt
tctggccgtcagttgccggataaagccattgatgtgctggataccgcctgcgcccgcgtg
gcgatcaacctctcttcgccaccgaagcaaatttcggcgctgaccacgctgagtcatcag
tgtgaagcggagatccgccagcttgagcgcgagatccgcatcggactgcgaactgatacc
tcgcggctgacggaagcgatcgtgcagtatgacgaaaccctgactgaacttgatgaactg
gaggccgcgtggcatctgcagcagacgctggtgcaggaaatcattgcactgcgtaagggg
ttgctggacgagcaggatgccaccgacaacgacaaaacagctacgcctgaagcagagata
acggacagtgatgccacaacggtggacgatccggtaacagaggtgacgaacattgagtcg
gtaacggcggatgaagcagaacaagggtattctgagcctgccatcatcccgacagagcgc
ctggcgcagttaaccgccgaactgaacgccctgcaccgcacgcagttactggtttcccca
cacgtcgataaaaagcaaatcgccgccgtgattgccgaatggaccggcgtgccgcttaat
cgcctgtcgcagaatgaaatgtcggtgatcaccgatctgccgcagtggctgggcaacacc
atcaagggccaggacctggcaattcagcacctgcacaaacatctgctcaccgcgcgtgcc
gaccttcgccgccccggtcgaccgctcggcgcgttcctgctggctggccccagcggtgtg
ggcaaaaccgaaaccgtactgcaactggcagatctgctttacggcggtcgccagtatctc
accaccatcaatatgtcggagttccaggaaaaacacaccgtttcgcgcctgattggttcc
cctccgggctatgtcggctacggggaaggtggtgtgctgaccgaagcaattcgccagaaa
ccgtattctgtggtgctgctcgacgaagtggaaaaagcccaccccgacgtgcttaacctg
ttctaccaggcgtttgataaaggcgaaatggccgatggcgaaggtcgtctgatcgactgc
aaaaacatcgtctttttcctgacctccaacctcggctatcaggtgattgttgagcatgcc
gaccatccggaactgatgcaggaagagctgtacccggtgctggctgacttcttcaagccc
gcattgctggcgcgtatggaagtggtgccctacctgccattatctaaagagacgctctcg
gtcattatcgccgggaagctggcaaggctggataacgtgctccgtacccgctttaacgcg
gaagtggtgattgaacctgccgtgaccgacgaaatcatgcagcgtgtcacccgcgccgaa
aacggcgcgcgaatgctggaatcggtgattgacggcgagatgttgccgccgctgtcgctg
ctgctgttgcagaaaatggcggcgaacacggcggttgcccgcatcgtactgggcgtggcg
gatggcgcgtttatcgctgacgtcgaagatgcgccggatgacgctgcggcggacgacatg
cagccggagcaggaagcagaggatatcgccgcgttatga

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