Citrobacter sedlakii: JY391_21990
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Entry
JY391_21990 CDS
T07832
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csed
Citrobacter sedlakii
Pathway
csed03420
Nucleotide excision repair
csed03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csed00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JY391_21990 (uvrD)
03430 Mismatch repair
JY391_21990 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csed03400
]
JY391_21990 (uvrD)
Enzymes [BR:
csed01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JY391_21990 (uvrD)
DNA repair and recombination proteins [BR:
csed03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JY391_21990 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
JY391_21990 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QUC30109
LinkDB
All DBs
Position
complement(4654909..4657071)
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLTVENNSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWFINSQKDEGLRPHHLQSFGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWVRLLAGDS
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRDLLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEACVEEVRLRATVSRPVSHQRMG
APLAENDTGYKLGQRVRHAKFGDGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagcctcaatgacaaacagcgcgaagcggtggccgcg
ccacgcagcaacatgctggttctcgccggggcggggagtggtaaaacccgcgttctggta
caccgtatcgcctggttgctgaccgtggagaacaactcgccgtattcgattatggcggtg
accttcaccaacaaagcggcggcggaaatgcgccaccgtatcggccaactgatgggcacc
agccagggcggaatgtgggtggggaccttccacgggctggcacaccgactgctgcgtgcg
caccacatggacgccaacctgccgcaggatttccagatcctggacagtgaagaccagttg
cgtctgctcaagcgcctgatcaaggcgatgaaccttgacgagaagcagtggccgccgcgc
caggccatgtggttcatcaacagccagaaagacgaagggctgcggccgcaccacctacag
agttttggaaatccggtagagcagacctggcagaaggtgtatcaggcctatcaggaagcg
tgcgatcgcgccggactggtggattttgccgaactgctgctgcgcgcccatgagctatgg
cttaataaaccgcatatccttcagcactaccgcgagcgtttcaccaatattctggtggac
gaatttcaggataccaataacatccagtacgcgtgggtgcgtttgcttgcgggcgatagc
ggaaaagtgatgattgtgggcgacgacgaccagtccatttatggctggcgcggcgcgcag
gtagaaaatatccagcgctttctcaacgacttccccggcgcgcaaaccattcgtctggag
cagaactaccgttcgaccagcaacatcctgagcgcggccaacgccctgattgaaaataac
aacggtcgactggggaaaaaactgtggaccgacggcgttgacggtgagcctatctcgctt
tactgcgccttcaacgaactggacgaagcgcggtttgtggttaaccgcatcaaaacctgg
caggacaacggtggggcgctggaacagtgcgccattctctaccgcagcaacgcccagtcg
cgcgtgctggaagaagccttgctgcaagccagcatgccgtaccgaatttatggcggtatg
cgcttcttcgaacgtcaggaaattaaagacgcactctcttacctgcgcctgatcgcgaac
cgcaatgacgacgccgcttttgaacgcgtggtcaatacgccaacccgcggaattggcgat
cgcacccttgacgtggtgcgccagacctcgcgcgatcgccagcttactctctggcaggcc
tgtcgcgacctgttgcaagaaaaagcgctggccggacgcgccgccagtgcgctccagcgt
tttatggagctgattgacgcgctggcgcaggaaaccgccgatatgccgctgcacgtgcag
actgaccgggtgattaaagattccgggctgcgcactatgtacgagcaggaaaaaggcgag
aaaggacaaacccgtattgaaaacttagaggagctggtgacggcgacgcgtcagttcagc
tacaacgaagaagatgaagatttaatgccgctgcaggcgttcctttcccacgcggcgctg
gaagcaggagaagggcaggcggatacctggcaggacgcggttcagctcatgacgttacac
tccgcgaaagggctggaattcccacaggtgtttatcgtcggcatggaagaggggatgttc
cccagccagatgtcgctggatgaaggggggcgtctggaagaagagcgccgcctggcgtac
gttggcgtaacacgcgcgatgcaaaaacttaccctgacctacgccgaaacccgccgtctg
tatggtaaagaggtctatcaccgcccgtcgcgctttatcggcgaactaccggaagcgtgt
gtggaagaagtccgcctgcgggcgacggtcagccgtccggtcagccatcagcggatgggc
gcgccccttgcagaaaacgataccgggtataagctgggccagcgcgtgcgccatgcgaag
ttcggtgacggcaccattgtgaatctggaaggcagcggcgagcacagccggttacaggtc
gccttccagggacaggggataaaatggctggtcgcggcatacgcgaagctggaaacggtc
tga
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