KEGG   Citrobacter sedlakii: JY391_22150
Entry
JY391_22150       CDS       T07832                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
csed  Citrobacter sedlakii
Pathway
csed03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csed00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    JY391_22150 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csed03019]
    JY391_22150 (rhlB)
Enzymes [BR:csed01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     JY391_22150 (rhlB)
Messenger RNA biogenesis [BR:csed03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     JY391_22150 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: QUC30135
LinkDB
Position
4685959..4687224
AA seq 421 aa
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQIHADAEPLAQTTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPATQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLIEEEWPDRAIVFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMNNLPKPLRLTRSRPGNGPRRAGAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccaaaggtg
atcgaagcccttgaaaataaagggtttcataactgcacgcccattcaggccctcgcgctg
ccgcttacgctggccggtcgcgatgttgcagggcaggcgcaaaccggtactggcaaaacg
atggcgttcctgacgtcaacgtttcattatcttctctctcatcccgcgattgacgatcgc
aaggtgaaccagccgcgcgccttaatcatggcgccgacgcgtgagttagccgtgcagatc
cacgccgatgccgagccgttggcgcagaccacaggtctgaagctgggtcttgcctacggc
ggcgacggctatgacaagcagctgaaagtgctggaaagcggcgtcgatattcttatcggc
accacaggccgtctgatcgactacgcaaaacagaatcacattaacctgggcgcgattcag
gtcgttgtcctcgacgaagccgatcgcatgtacgatctgggctttattaaagatatccgc
tggctgttccgccgcatgccgccagccacacagcgtctgaacatgctgttctccgcaacc
ctctcttaccgcgtgcgtgaactggcgttcgaacaaatgaacaacgccgaatacgtggaa
gtcgagccggaacaaaaaaccggccaccgtattaaagaagagcttttctatccgtctaac
gaagagaagatgcgccttctacaaacattaattgaagaagaatggccggatcgcgccatt
gttttcgctaacacgaaacaccgctgtgaagacatctggggccatctggccgccgatggt
catcgcgtgggcctgctgacgggcgacgtggcgcagaaaaaacgcctgcgcattctcgac
gagttcacccgcggcgatctggatattcttgttgctaccgatgttgccgcacgcgggctg
catattcccgcagtcacccacgtatttaactacgatttgccggacgattgcgaagattac
gtccaccgcattggccgaaccggacgcgcaggcgcaagtggccactccatcagcctggcg
tgtgaagagtacgcgctgaacctgccggcgatcgaaacctacatcggtcactccattccg
gtcagcaaatacaatccggatgcgctgatgaacaatctgccgaagccgctgcgtctgacg
cgctcgcgcccaggcaatggcccgcgtcgggctggcgccccgcgtaaccgtcgtcgttcg
ggttaa

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