Chlamydia serpentis: C10C_0590
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Entry
C10C_0590 CDS
T08163
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha,DNA-directed RNA polymerase subunit alpha,DNA-directed RNA polymerase, alpha subunit/40 kD subunit,DNA-directed RNA polymerase, alpha subunit,Bacterial RNA polymerase, alpha chain C terminal domain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
csee
Chlamydia serpentis
Pathway
csee03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csee00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C10C_0590 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csee03021
]
C10C_0590 (rpoA)
03400 DNA repair and recombination proteins [BR:
csee03400
]
C10C_0590 (rpoA)
Enzymes [BR:
csee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C10C_0590 (rpoA)
Transcription machinery [BR:
csee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C10C_0590 (rpoA)
DNA repair and recombination proteins [BR:
csee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C10C_0590 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_A_bac
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
SPN73746
UniProt:
A0A2R8FBQ7
LinkDB
All DBs
Position
I:complement(688442..689566)
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AA seq
374 aa
AA seq
DB search
MSDNTQNLLYDKFELPETVKMLPVEGLSIDKHARFIAEPLERGMGHTLGNALRRALLIGL
EAPAIISFAMTGVLHEYMAIEGVVEDVTNIILNLKGALLKKYPMQDSSLGRTTQVLKASI
SIDASDLAGANGQKEVTLQDLLQEGDFEAVNPDQVIFTVTQPIQVEVVLRVAFGRGYTPS
ERIILEDKGVYEIVLDAAFSPVTLVNYFVEDTRVGQDTDFDRLVLVVETDGRVSPKEALA
FSTQILTKHFSIFENMDEKKIVFEEAISIEKENKDDILHKLILGINEIELSVRSTNCLSN
ANIETIGELVIMPEPRLLQFRNFGKKSLCEIKNKLKEMKLELGMDLAQFGVGLDNVKEKM
KWYAEKIRAKNTKG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataacacacaaaatttgctttatgataaattcgaactgcctgagacagtgaaa
atgttgcctgttgaagggctttcaatagataaacacgctcgttttattgctgagccctta
gaaagagggatgggtcatactttaggaaatgctttaaggcgtgctttacttattggttta
gaagctccagctattatttcttttgctatgacaggggtcttacatgagtatatggcaatt
gaaggggttgttgaggatgtaactaatatcattctgaatttaaagggagccctattaaag
aagtacccaatgcaagatagttctttaggaaggacaacgcaggtattaaaggcttcgatt
tctatagatgcttccgatctagctggggctaatggacaaaaagaagttactctacaagat
ttgttgcaagaaggagattttgaggctgtcaacccagatcaagtaatctttactgttact
caacctatacaagttgaagtggttttgcgcgttgcttttggtagaggctataccccttct
gaaagaatcattttggaagacaaaggtgtttatgaaattgttttggatgctgcgttttct
ccagtaactttagtgaattattttgtagaagatacacgggttggtcaggatacggatttt
gatcgcttagttttagtcgtggaaactgatggcagggtatctcctaaagaagctttagct
ttttctacccagattttgactaagcatttttctatttttgagaatatggatgagaagaaa
atcgtatttgaagaagctatttctattgaaaaagaaaataaagacgatattcttcacaag
ttgattttgggaattaatgaaattgaactctcagtaagatcaacaaattgtttgtctaat
gcaaatatagaaaccattggcgaacttgttatcatgccagagccgcgattgttgcaattt
agaaattttggaaagaagtctctttgcgaaatcaagaataagttgaaagaaatgaagctt
gaattaggcatggaccttgcgcagtttggtgtgggtttagataatgtgaaagaaaaaatg
aagtggtatgccgaaaagattcgggctaaaaatacaaagggatag
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