Chlamydia serpentis: C10C_0742
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Entry
C10C_0742 CDS
T08163
Name
(GenBank) RNA polymerase factor sigma-54,DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog,RNA polymerase sigma-54 factor,Sigma-54, DNA binding domain
KO
K03092
RNA polymerase sigma-54 factor
Organism
csee
Chlamydia serpentis
Pathway
csee02020
Two-component system
csee02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csee00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C10C_0742
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C10C_0742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csee03021
]
C10C_0742
Transcription machinery [BR:
csee03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C10C_0742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
23S_rRNA_IVP
Motif
Other DBs
NCBI-ProteinID:
SPN73886
UniProt:
A0A2R8FC44
LinkDB
All DBs
Position
I:complement(840869..842155)
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AA seq
428 aa
AA seq
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MFQQKQQLSLKYLPSLRMQQGLRMLQSPLTELSSYITQEIIHNPFLDLSSLEDEESSFSS
PFISSTFAYLNNTPAPQKSLYTHILSQIDEIFSTSQERLIAHQIAGNLSDQGLFLQNPED
LADQLELPLNEIYRVWNTIQNLNPLGIASPSLQSYWMRLLRDSSHQKAYTIIRDFYPLIT
NCEFLPIMKKLRLSLPELLTILKKALGTIPWSPAAAYTMKPLVATPLPDIYLFYHSGSWD
IKVSARGLPSIKLNRKTFDFYEQLPKEEQNNLTQQILSAKWLIKNLRKREETLLRIMESL
LPKQEKFLLGNISSPEPVAIKSLAEDLALHESTIFRAIENKVIATPIGIFPLKRLFPKGV
HQDSSHSKEKILQWIYQWISTEQAPLSDRTISDRITAKGIPCARRTVAKYRSQLNILPAN
KRKMRLRM
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaacaaaagcagcagttgtctctaaagtatctcccctcactaaggatgcaacaa
ggcttgcgaatgctgcagtcaccgcttactgaattatcttcatatatcacacaagaaatc
attcataatccttttctcgatctctcttccttagaagacgaggaaagctctttttcttct
ccatttataagctctacatttgcttatttaaataatacccctgcacctcaaaaatccttg
tacacccatattctctctcaaattgatgaaatcttctccacttcccaagaacgactcatt
gcccatcaaattgctggcaacctttctgatcaaggactatttctacaaaatcctgaggat
cttgctgatcagctcgagcttcccttaaacgaaatctatagagtttggaatactatacaa
aatttaaatcccttaggaattgcctctccctcgctacaaagctattggatgaggctcctc
cgagactcctctcaccaaaaagcatatactatcattcgcgatttctatcccctcattacc
aactgtgagtttcttcctattatgaaaaaactccgactatctttacccgaacttctaact
attttaaaaaaagcactcggaacaatcccttggagtcctgcagctgcctacaccatgaaa
cctcttgtggcaaccccgcttcctgatatttatcttttttatcactcaggatcttgggat
atcaaagtgagtgcgcgaggccttccatctataaagcttaatagaaaaacatttgacttc
tacgaacagctgcctaaagaagaacaaaataaccttacacaacaaattttatcagcgaag
tggctaattaaaaatcttagaaaacgagaagaaacgctccttcgcatcatggagtcacta
cttcccaaacaagaaaagtttttattagggaatatttcctctccagaacctgtagcaatt
aaaagtcttgccgaagatctagctctccatgaatctacgatctttcgtgctatagaaaat
aaagtaattgctacccccataggtatttttcctttaaaacgacttttccctaaaggagta
catcaagattcctctcattctaaagagaagatattgcagtggatttatcaatggatctct
actgaacaagctcctctatcggatagaactatcagtgatagaattactgcaaaaggcatt
ccttgtgcacgacgcactgttgcaaaataccgatctcagcttaacattcttcctgcgaac
aaaagaaaaatgcgactccgaatgtaa
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