Clavibacter seminis: KYT88_00030
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Entry
KYT88_00030 CDS
T11076
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
csei Clavibacter seminis
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csei03032
]
KYT88_00030 (gyrB)
03400 DNA repair and recombination proteins [BR:
csei03400
]
KYT88_00030 (gyrB)
Enzymes [BR:
csei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KYT88_00030 (gyrB)
DNA replication proteins [BR:
csei03032
]
Prokaryotic type
DNA Topoisomerases
KYT88_00030 (gyrB)
DNA repair and recombination proteins [BR:
csei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KYT88_00030 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
HATPase_c
Toprim
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UKF25119
LinkDB
All DBs
Position
5957..8002
Genome browser
AA seq
681 aa
AA seq
DB search
MTSDATQDLPDDSTPDEVEVEETHNDSDHITRQQVSNDYGANEIQVLEGLEAVRKRPGMY
IGSTGPRGLHHLVSEIVDNSVDEALAGFASDIQITMRKDGGIRVVDDGRGIPVDIHPVEG
ISTVELVLTKLHAGGKFGGGGYAVSGGLHGVGSSVVNALSERLDVEVRRQGAVWRQSFTI
GVPDAPLQKGEGSTETGTTITFWPSREIFETVEFDYDTLRARFQQMAFLNKGLALTLHDE
RSGDAAEHRTEKFLYERGLVDYVEHLVKAKKTEVVNADVIAFESEDTVKKISLEVAMQWT
TSYTESVHTYANTINTHEGGTHEEGFRAALTTLVNRYARENKLLREKDENLTGDDVREGL
TAVISVKLGEPQFEGQTKTKLGNTEAKAYVQRIVGQQLGDWLEKNPSQAKDIIRKGMQAS
QARLAARKAREQTRRKGLLESGGMPGKLKDCQSKDPALSEVFLVEGDSAGGSAVQGRNPT
TQAILPLRGKILNVEKARLDRALQNNEVQSMITAFGAGIGEDFNAEKVRYHKIVLMADAD
VDGQHITTLLLTLLFRYMRPLIELGYVYLAQPPLYRLKWSNAEHQYVYTDAERDALLVHG
QANGKKMPKDNGIQRYKGLGEMDYKELWETTMDPATRTLMQVTLDDAAGADEVFSTLMGE
DVESRRSFIQRNAKDVRFLDI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacatcggatgccactcaggacctccccgacgactccacccccgacgaggtggaggtc
gaggagacgcacaacgactccgaccacatcacccgccagcaggtgagcaacgactacggc
gccaacgagatccaggtgctcgagggcctcgaggccgtgcgcaagcggcccggcatgtac
atcgggtccaccggcccgcgcggtctgcaccacctggtgagcgagatcgtcgacaactcc
gtcgacgaggccctcgccgggttcgccagcgacatccagatcaccatgcgcaaggacggc
gggatccgcgtcgtcgacgacggtcgcgggatccccgtggacatccaccccgtcgagggc
atctccacggtcgagctcgtcctcaccaagctgcacgccggcggcaagttcggcggcggc
ggatacgcggtgtccggcggcctgcacggcgtcggcagctccgtggtgaacgcgctgtcg
gagcgcctcgacgtcgaggtccgccgccagggcgccgtgtggcgccagagcttcaccatc
ggcgtgccggacgcaccgctccagaagggagagggatccaccgagacgggcaccaccatc
accttctggccgagccgcgagatcttcgagaccgtcgagttcgactacgacaccctgcgc
gcgcgcttccagcagatggccttcctcaacaagggcctggcattgacgctgcacgacgag
cgctcgggcgacgccgcggagcaccgcaccgagaagttcctctacgagcggggactcgtc
gactacgtggagcacctcgtcaaggcgaagaagaccgaggtcgtcaacgccgacgtcatc
gccttcgagtccgaggacacggtcaagaagatcagcctcgaggtcgcgatgcagtggacc
acctcctacacggagagcgtccacacctacgccaacaccatcaacacgcacgagggcggc
acgcacgaggaggggttccgcgcggcgctcaccacgctcgtcaaccgctatgcgcgcgag
aacaagctgctccgcgagaaggacgagaacctcacgggcgacgatgtccgcgagggcctc
accgccgtcatctcggtgaagctcggcgagccgcagttcgagggccagaccaagaccaag
ctcggcaacaccgaggccaaggcctacgtccagcgcatcgtcggacagcagctgggggac
tggctcgagaagaacccctcgcaggcgaaggacatcatccgcaaggggatgcaggcttcg
caggcgcgtctcgccgctcgcaaggcgcgcgagcagacccgacgcaagggcctcctcgag
tcgggcggcatgcccggcaagctcaaggactgccagagcaaggacccggcgctcagcgag
gtcttcctcgtcgagggcgactcggccggcggatccgcggtgcaggggcgcaaccccacg
acgcaggcgatcctcccgctgcgaggcaagatcctcaacgtcgagaaggcccggctcgac
cgcgcgctgcagaacaacgaggtgcagtcgatgatcaccgcgttcggcgcgggcatcggc
gaggacttcaacgccgagaaggtcaggtaccacaagatcgtgctgatggccgacgcggac
gtcgacggccagcacatcacgaccctcctgctcaccctgctgttccgctacatgcggccc
ctcatcgagctcggctacgtgtacctcgcgcagccgccgctgtaccggctcaagtggtcg
aacgccgagcaccagtacgtctacaccgatgccgagcgcgatgccctgctggtgcacggg
caggccaacgggaagaagatgccgaaggacaacggcatccagcgctacaagggcctcggc
gagatggactacaaggagctgtgggagaccaccatggatccggccacccggacgctcatg
caggtcacgctcgacgacgcggcgggtgccgacgaggtgttctcgacgctgatgggcgag
gacgtcgagtcccgccggagcttcatccagcgcaacgccaaggacgtcaggttcctcgac
atctga
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