Clavibacter seminis: KYT88_00035
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Entry
KYT88_00035 CDS
T11076
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
csei Clavibacter seminis
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csei03032
]
KYT88_00035 (gyrA)
03400 DNA repair and recombination proteins [BR:
csei03400
]
KYT88_00035 (gyrA)
Enzymes [BR:
csei01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
KYT88_00035 (gyrA)
DNA replication proteins [BR:
csei03032
]
Prokaryotic type
DNA Topoisomerases
KYT88_00035 (gyrA)
DNA repair and recombination proteins [BR:
csei03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KYT88_00035 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF7737
VPS11_N
Motif
Other DBs
NCBI-ProteinID:
UKF25120
UniProt:
A0ABY3T7E7
LinkDB
All DBs
Position
8085..10772
Genome browser
AA seq
895 aa
AA seq
DB search
MADDNTPDDEQGTGATPDDEQASSTDDALPQEGVTPASAAAAASDSLPGAIVDPDATVVV
THDRIEQVDLQLEMQRSFLDYAMSVIVQRALPEVRDGLKPVHRRVIYAMYDGGYRPDRSF
FKSARVVGEVMGQFHPHGDSSIYDALVRLVQPWSLRYPLALGQGNFGSAGNDGAAAPRYT
ETKMAPLAMEMVRDITEDTVDFQDNYDGRTLEPKILPSRFPNLLVNGSVGIAVGMATNIP
PHNLREVASGAQWLLAHPDANREELLEALLERIKGPDFPTGAQVLGTKGIIDAYRTGRGS
ITMRAVVAVEEIQGRVCLVVTELPYQVNPDNLAIKIAELVKDGKLGGVADIRDETSGRTG
QRLVIVLKRDAVAKVVLNNLYKHTQLQENFGANMLAIVDGIPRTLALDGFISAWVDHQID
VIVRRTQYRLNEAEARAHILRGYLKALDALDDVIALIRRSETVEVARSGLMKLLDIDELQ
ANAILEMQLRRLAALERQKIQDQAAELEQRIAEYKHILATPTVQREIISTELQEITDKYG
DDRRTEIMLGFDGDMSMEDLIPEEEMVVTVTRGGYIKRTRIDNYRSQHRGGKGVRGAQLR
ADDVVEHFFVTTTHHWLLFLTDKGRVYRAKAYELQEAGRDAKGQHVANLLAMQPDEEIQQ
VLDIRDYQVAQYLVLATRDGLMKKTALTEYDTNRTGGIIAINLRDGDALVSALLVDEDDD
LLLVSRKGMSLRFSADNQALRPMGRSTSGVKGMTFRGDDTLLSASVVGEQGYVFVVTEGG
FAKRTAADQYRVQNRGGMGIKVAKLQDARGDLAGALIVGEEDEILVVLASGKVVRSVVAE
VPAKGRDTMGVVFARFADDDRIISLAKNSERNLVVPEAAPDASDGTAAGKGTPDE
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgacaacactccggacgacgagcagggcacgggggcgaccccggacgacgag
caggcgtcgtcgaccgacgacgcccttccccaggagggcgtgacgccggcgtccgccgcc
gccgcggcatccgactccctgcccggtgcgatcgtcgaccccgatgccaccgtcgtcgtc
acgcacgaccgcatcgagcaggtcgacctccagctcgagatgcagcgctcgttcctcgac
tacgcgatgagcgtcatcgtccagcgcgccctccccgaggtgcgcgacggcctcaagccc
gtgcaccgccgcgtgatctacgccatgtacgacggcggctaccgtcccgaccgctccttc
ttcaagtcggcccgcgtggtcggcgaggtcatggggcagttccacccgcacggcgactcg
tccatctacgacgcgctggtgcggctcgtccagccgtggagcctccgctacccgctggcg
ctcggccagggcaacttcggctcggccggcaacgacggcgccgccgcgccgcgatacacc
gagaccaagatggcgccgctggccatggagatggtccgggacatcaccgaggacacggtc
gacttccaggacaactacgacggccgcacgctcgagccgaagatcctgccgtcgcgcttc
ccgaacctgctggtcaacggatccgtcggcatcgcggtcggcatggccaccaacatcccg
ccgcacaacctccgcgaggtcgcgtccggcgcccagtggctgctcgcccaccccgacgcg
aaccgggaggagctcctcgaggcgctcctcgagcggatcaaggggccggacttcccgacg
ggtgcgcaggtgctcggcaccaagggcatcatcgacgcgtaccgcacgggccgcgggtcc
atcacgatgcgcgcggtcgtcgcggtcgaggagatccagggccgcgtgtgcctcgtggtc
accgagctgccgtaccaggtgaaccccgacaacctcgcgatcaagatcgccgagctcgtg
aaggacggcaagctcggcggagtcgccgacatccgcgacgagacctcgggccgcaccggc
cagcgcctcgtcatcgtgctcaagcgcgacgcggtggcgaaggtcgtgctgaacaacctc
tacaagcacacgcagctgcaggagaacttcggcgcgaacatgctggcgatcgtcgacggg
atcccacggaccctcgcgctcgacggcttcatctccgcgtgggtcgaccaccagatcgac
gtcatcgtccgccgcacgcagtaccgactcaacgaggccgaggcccgtgcgcacatcctg
cgcggatacctgaaggcgctcgacgcgctcgacgacgtcatcgcgctgatccgccggtcg
gagacggtcgaggtcgcgcgcagcgggctgatgaagctgctcgacatcgacgagctgcag
gccaacgccatcctcgagatgcagctccgacgcctcgccgcgctcgagcgccagaagatc
caggaccaggcggccgagctcgagcagcgcatcgccgagtacaagcacatcctggcgacg
cccaccgtgcagcgcgagatcatcagcaccgagctgcaggagatcaccgacaagtacggc
gacgaccggcgcacggagatcatgctcggcttcgacggcgacatgagcatggaggacctc
atccccgaggaggagatggtggtcacggtcacgcgcggcgggtacatcaagcgcacgcgc
atcgacaactaccgcagccagcaccgtggaggcaagggcgtccgcggcgcgcagctccgg
gcggacgacgtggtcgagcacttcttcgtcacgaccacgcaccactggctcctcttcctc
acggacaagggccgcgtctaccgcgccaaggcgtacgagctgcaggaggccggccgcgac
gccaagggccagcacgtggcgaacctgctcgccatgcagccggacgaggagatccagcag
gtcctcgacatccgcgactaccaggtggcgcagtacctcgttctcgcgacccgcgacggc
ctgatgaagaagacggccctcacggagtacgacacgaaccgcaccggcggcatcatcgcg
atcaacctccgcgacggagacgcgctcgtgtcggcgctgctggtggacgaggacgacgac
ctgctcctcgtgtcgcgcaagggcatgtcgctgcggttctccgccgacaaccaggcgctc
cgtccgatgggccggtcgacgtccggcgtgaagggcatgacgttccgcggggacgacacg
ctcctcagcgcatccgtcgtcggcgagcagggctacgtgttcgtcgtcaccgaggggggc
ttcgcgaagcgcacagccgcggaccagtaccgcgtgcagaaccgcggcggcatgggcatc
aaggtggccaagctgcaggatgcccgaggcgacctcgcgggtgcgctcatcgtcggcgag
gaggacgagatcctcgtcgtgctcgccagcggcaaggtggtacggtctgtcgtggccgag
gtcccggctaagggccgcgacaccatgggtgtcgtgttcgcccggttcgcggacgacgac
aggatcatctcactggccaagaactccgaacgcaacctggtggtccccgaagctgcgccc
gacgcgtccgacggtaccgccgctggaaagggaacacctgatgagtag
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