Clavibacter seminis: KYT88_01555
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Entry
KYT88_01555 CDS
T11076
Name
(GenBank) DUF4981 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
csei Clavibacter seminis
Pathway
csei00052
Galactose metabolism
csei00511
Other glycan degradation
csei00600
Sphingolipid metabolism
csei01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
KYT88_01555
09103 Lipid metabolism
00600 Sphingolipid metabolism
KYT88_01555
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
KYT88_01555
Enzymes [BR:
csei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
KYT88_01555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2_N2
Glyco_hydro_2
Motif
Other DBs
NCBI-ProteinID:
UKF25411
LinkDB
All DBs
Position
333171..336161
Genome browser
AA seq
996 aa
AA seq
DB search
MSHLDDVAPGSASRLEPRARFATDAPVHSLDGDWRFRLLPEAPVDAADRAPEVADPALDD
AALDAAGWTTLPVPSHWVLHGHGSPAYTNLQYPFPIDPPHVPDANPTGEHRRTFELPASF
ADAERVLLRTDGIEGLATFWVNGVEAGWTTGSRLATELDVTELLVPGENVLGIRVHQWSA
ASYLEDQDQWWLPGVFRPVELLARPAGALDDVRVRADRDPADGSGRLDVQVDGAFPVMVR
VPELGIHVTWETAADVGPVAIPAVDAWSAERPRLYDATVSSPGETASLRIGFRTVRIDGD
ALLVDGRLLTFRGVNRHESHPERGRVFDEAEARADLELMKRNGVNAIRTSHYPPHPRLLD
IADELGFWVVLECDLETHGFWDVEWRDNPSDDPRWRDAYLDRIARTVGRDRNHPSIVMWS
LGNESGTGRNIAAMSAWVRRADPTRPVHYEGDLTGEHTDVYSRMYPTLEEIDSVCGTPVA
SIHETTGATGAKQRAKPFILCEYGHAMGNGPGSLADYEDAIDRWPRLHGGFVWEWRDHGL
LARTADGRPFHAYGGDFGEPVHDGPFVMDGLLLSDGTPTPGLTELAAVIAPVRVRVAADG
SGVRVENRRHSASTDDVDLVWILAHDGRPVARGILEHAPLDAGDAATIPLPVEARAAGHA
EEAHVTVQVVTRHDAPWAEAGHVVSSHQALVRDRPAPRPRPAGRWRGDALGAGTFDARGD
LVAWNGVPVRGPRLELWRAPTENDRGAGQGSYELAEPELTRGRGAEETPPSADRWRERGL
HRLTHRLLGTSRTDVGLETRMRVQAAHSGAGVDVAFRWTATDRGLLLATEVVPFGTWDCT
WPRVGVRIDLPAALAEHPVAWHGTGPGESYADSSTASRVGRFASSVDGLAVAYARPQENG
HRPELRSLAIGDGSATPLTVTTVPDASGHRAGFQLSRWTPQQMTGVGHPHELPASDGLHL
FLDDAQHGLGSRACGPDVLPRHALWPSLRTWEVLLG
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacctcgacgacgtcgcccccggatccgcctcgaggctcgagccgcgcgcccgg
ttcgcgacagatgcgcccgtccactccctcgacggcgactggcggttccgcctgctgccc
gaggctccggtcgacgccgccgaccgcgcgcccgaggtcgcggatccggcgctcgacgac
gccgcgctcgacgcggccggctggaccacgctgcccgtcccgtcgcactgggtgctgcac
ggccacggatctcccgcgtacacgaacctgcagtacccgttccccatcgacccgccgcac
gtgcccgacgcgaacccgaccggcgagcaccggcggaccttcgagctgccggcgtcgttc
gcggacgccgagcgcgtgctgctgcgcaccgacgggatcgaggggctcgccacgttctgg
gtcaacggcgtcgaggcgggctggaccaccggcagccgcctcgcgaccgagctcgacgtg
acggagctgctcgtgcccggcgagaacgtgctcgggatccgcgtgcaccagtggtccgcc
gcctcctacctggaggaccaggaccagtggtggctgcccggcgtcttccgcccggtcgag
ctgctcgcgcggcccgccggcgcgctcgacgacgtgcgcgtgcgggccgaccgcgacccg
gccgacggatccggccgcctcgacgtgcaggtggacggcgctttccccgtcatggtgcgc
gtgccggagctcgggatccacgtgacgtgggagaccgcggccgacgtcgggcccgtcgcg
atccccgcggtcgacgcgtggagcgccgagcggccgcgcctctacgacgcgaccgtgtcg
tcgcccggggagacggcgagcctgcggatcggcttccgcacggtgcgcatcgacggcgac
gcgctcctcgtcgacggccggctcctcaccttccgcggcgtcaaccggcacgagtcgcac
cccgagcgcggtcgcgtgttcgacgaggccgaggcgcgcgccgacctcgagctgatgaag
cggaacggcgtgaacgcgatccgcacctcccactacccgccgcacccgcgcctcctcgac
atcgccgacgagctcggcttctgggtcgtgctcgagtgcgacctcgagacgcacggcttc
tgggacgtcgagtggcgggacaacccctccgacgacccgcgctggcgcgacgcctacctc
gaccgcatcgcgcgcacggtgggccgcgaccgcaaccacccgtcgatcgtgatgtggtcg
ctcggcaacgagtccggcacagggcgcaacatcgccgccatgtcggcgtgggtcaggcgc
gcggatcccacccggcccgtgcactacgagggcgacctcacgggcgagcacaccgacgtc
tactcgcgcatgtacccgacgctcgaggagatcgactcggtgtgcggcacgcccgtcgcg
agcatccacgagaccacgggcgcgaccggcgcgaagcagcgcgcgaagccgttcatcctg
tgcgagtacgggcacgcgatgggcaacggccccggatccctcgccgactacgaggacgcg
atcgaccgctggccgcgcctgcacggcggcttcgtgtgggagtggcgcgaccacgggctg
ctcgcgcgcacggccgacgggcgccccttccacgcgtacggcggcgacttcggcgagccc
gtgcacgacgggcccttcgtgatggacggactgctgctctccgacgggacgcccacgccg
ggcctcaccgagctcgcggcggtcatcgcgcccgtgcgcgtgcgggtcgcggccgacggc
tccggcgtgcgcgtcgagaaccggcggcacagcgcatccaccgacgacgtcgacctggtc
tggatcctcgcccacgacggcaggcccgtcgcccgcgggatcctcgagcacgcgccgctc
gacgccggtgatgcggcgacgatcccgctgcccgtcgaggcgcgcgccgccggccacgcc
gaggaggcgcacgttaccgtgcaggtcgtcacgcgccacgacgcgccctgggccgaggcg
gggcacgtcgtgtcgtcgcaccaggcgctcgtgcgcgaccggcccgcgccccggccgcgt
cccgccgggcgctggcgcggggacgccctcggcgccgggaccttcgacgcgcgcggcgac
ctcgtcgcgtggaacggcgtgcccgtgcgcggcccgcggctggagctgtggcgcgcgccc
accgagaacgaccgcggagccggccagggatcctacgagctggccgagcccgagctcacc
cgcggccgcggcgccgaggagactccgccgtcggcggaccgctggcgggagcgcgggctg
caccgcctcacccaccggctcctcggcacgagccgcaccgacgtcggcctggagacgcgc
atgcgcgtgcaggccgcgcactcgggcgcgggcgtcgacgtcgccttccgctggaccgcg
accgaccgcggcctgctgctcgccaccgaggtcgtgcccttcggcacctgggactgcacg
tggccgcgggtcggcgtgcgcatcgatctgccggccgcgctcgccgagcatccggtcgcc
tggcacggcaccggaccgggggagtcctacgccgacagcagcacggcctcgcgcgtcggc
cgcttcgcgtcgagcgtcgacggcctcgcggtcgcctacgcccgtccgcaggagaatggc
caccggccggagctgcggtcgctcgcgatcggcgacggatccgcgacgccgctgaccgtg
acgacggtgcccgacgcatcaggacaccgcgcgggcttccagctctcccgctggacgccg
cagcagatgaccggcgtcggccacccgcacgagctgcccgcctccgacggcctgcacctg
ttcctcgacgacgcccagcacggcctcggatcccgcgcgtgcggccccgacgtgctgccg
cgccacgcgctctggccgtcgctgcgcacgtgggaggtgctgctggggtga
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