Clavibacter seminis: KYT88_03065
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Entry
KYT88_03065 CDS
T11076
Symbol
rocD
Name
(GenBank) ornithine--oxo-acid transaminase
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
csei Clavibacter seminis
Pathway
csei00330
Arginine and proline metabolism
csei01100
Metabolic pathways
csei01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
KYT88_03065 (rocD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csei01007
]
KYT88_03065 (rocD)
Enzymes [BR:
csei01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
KYT88_03065 (rocD)
Amino acid related enzymes [BR:
csei01007
]
Aminotransferase (transaminase)
Class III
KYT88_03065 (rocD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Big_2
Motif
Other DBs
NCBI-ProteinID:
UKF25698
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Position
628671..629915
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AA seq
414 aa
AA seq
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MTDTIDRPAASDAGALAIHAEEAHAAHNYHPLPVVVASGEGAWVTDLDGRRLLDCLAAYS
AVNFGHSHPELVRVATEQLGRITLTSRAFHNDKLGPFVTALAELAGKDMVLPMNTGAEAV
ESGIKVARAWGYRVKGVAAGRAKIIVMAGNFHGRTTTIVSFSDDEEARADFGPFTPGFVT
VPYGDAAALEAAIDADTVAVLVEPIQGEAGIVVPPAGYLADVRRICSRERVLMIADEIQS
GLGRTGATFECDNSDVVPDLYLLGKALGGGIVPVSAVVGDADVLGVIQPGQHGSTFGGNP
LAAAVGHAVVDMLATGEPQERARRLGAVLHARLADLVGHGVLEVRGRGLWAGIDIDPALA
TGRAVCERLAERGVLAKDTHGSTIRLAPPIVVEEEDLVWAVGQLAEVLAELGAR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccatcgaccgccccgccgcatccgacgccggcgccctcgcgatccacgcc
gaggaggcgcacgccgcgcacaactaccacccgctccccgtcgtggtcgcgtccggcgag
ggcgcgtgggtcaccgacctcgacggccggcgcctcctcgactgcctcgccgcgtactcc
gcggtgaacttcgggcactcgcatccggagctggtgcgggtcgcgaccgagcagctcgga
cggatcacgctcacgagccgcgcgttccacaacgacaagctgggcccgttcgtcacggcg
ctcgccgagctcgccggcaaggacatggtcctgccgatgaacacgggcgccgaggccgtg
gagtccgggatcaaggtcgcgcgcgcctggggctaccgcgtgaagggcgtggcagcgggc
cgcgcgaagatcatcgtcatggccggcaacttccacggccgcaccaccaccatcgtgagc
ttcagcgacgacgaggaggcgcgcgccgacttcgggccgttcacgcccggcttcgtcacc
gtgccgtacggcgacgccgcggcgctcgaggccgcgatcgacgcggacacggtcgcggtg
ctcgtcgagccgatccagggcgaggccggcatcgtcgtgccgcccgcggggtacctcgcc
gacgtgcgccggatctgctcgcgcgagcgggtgctgatgatcgccgacgagatccagtcc
ggcctcggccgcacgggcgcgaccttcgagtgcgacaactccgacgtcgtgcccgacctg
tacctgctcggcaaggcgctcgggggcggcatcgtgcccgtctccgcggtcgtcggggat
gcggacgtgctgggcgtcatccagccggggcagcacggatccacgttcggcggcaacccg
ctcgccgcggccgtgggccacgcggtggtcgacatgctcgcgacgggcgagccgcaggag
cgcgcgcgtcgcctcggcgccgtgctgcacgcccggctggcggatctcgtcggccacggc
gtcctcgaggtgcgcggccgcggcctgtgggccggcatcgacatcgacccggcgctcgcc
acgggccgcgcggtatgcgagcggctcgccgagcgcggcgtgctcgcgaaggacacgcac
ggctcgacgatccggctcgcgccgcccatcgtggtggaggaggaggacctcgtctgggcc
gtcggccagctcgccgaggtgctcgcggagctcggggcgcgctga
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