Clavibacter seminis: KYT88_04390
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Entry
KYT88_04390 CDS
T11076
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
csei Clavibacter seminis
Pathway
csei00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KYT88_04390 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
csei01007
]
KYT88_04390 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csei03016
]
KYT88_04390 (lysS)
Enzymes [BR:
csei01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
KYT88_04390 (lysS)
Amino acid related enzymes [BR:
csei01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KYT88_04390 (lysS)
Transfer RNA biogenesis [BR:
csei03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
KYT88_04390 (lysS)
Prokaryotic type
Other AARSs
KYT88_04390 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
TOBE_3
ThiN
Motif
Other DBs
NCBI-ProteinID:
UKF25944
UniProt:
A0ABY3TAW5
LinkDB
All DBs
Position
909190..910731
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AA seq
513 aa
AA seq
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MTDSPGTPATPETAPAPAVEGSAEDVAEQKAVRLAKRARLNAEGGPGEGAYPVQVPVTTT
IPAVRAEFGHLEPGEETDHVVGIAGRVVHFRNTGKLCFATLQAGDGTRIQAMISLAEVGE
EALAAWKELVDLGDHVFVAGRVIASRKGELSIMATEWRIASKALLPLPNLHSELSDETRV
RSRYLDLIVRDQARKNVLDRAKVNASMRETFRQRGYVEVETPMLQVMHGGASARPFVTHS
NAFDTEMYLRIAPELYLKRAVVGGIDRVFEINRNFRNEGADSTHSPEFAMLEAYEAYGDY
TSIAELTQTLVQDAAMAVAGSHVVTWADGTEYDLGGEWDRISMYGSLSEAAGVEITPATT
VDELQAIADREGVVVPLSTHGKLVEELWEHFVKGGLERPTFVLDFPVETSPLTRAHRSIE
GVVEKWDLYIRGFELATGYSELVDPVVQRERFVDQARQSARGDDEAMPLDEEFLRALEHG
MPPSGGMGMGVDRLLMAITGLGIRETILFPLVK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacagccccggaacgcccgcgacgcccgagaccgcccccgctcccgccgtggag
ggatccgccgaggacgtcgccgagcagaaggccgtgcgcctcgccaagcgcgcccgcctc
aacgccgagggcggccccggcgagggcgcgtacccggtgcaggtcccggtcaccacgacc
atccccgcggtccgcgccgagttcggccacctcgagcccggcgaggagaccgaccacgtg
gtcggcatcgccggccgcgtcgtccacttccgcaacaccggcaagctgtgcttcgccacg
ctccaggcgggcgacggcacgcgcatccaggccatgatctcgctggccgaggtgggcgag
gaggcgctcgccgcctggaaggagctcgtcgacctcggcgaccacgtcttcgtcgcgggc
cgcgtcatcgcgagccgcaagggcgagctgtcgatcatggccaccgagtggcgcatcgcc
tcgaaggccctgctgcccctgcccaacctgcactccgagctctcggacgagacccgcgtc
cgcagccgctacctcgacctcatcgtgcgcgaccaggcgcgcaagaacgtcctcgaccgc
gcgaaggtcaacgcctccatgcgcgagacgttccgccagcgcggatacgtcgaggtcgag
acgcccatgctgcaggtgatgcacggcggcgcatccgcccgcccgttcgtcacgcactcc
aacgccttcgacaccgagatgtacctccgcatcgcgcccgagctctacctcaagcgcgcg
gtcgtcggcggcatcgaccgcgtcttcgagatcaaccgcaacttccgcaacgagggcgcc
gactcgacgcacagccccgagttcgcgatgctcgaggcgtacgaggcctacggcgactac
acctccatcgccgagctcacccagacgctcgtgcaggacgcggccatggccgtcgccggc
agccacgtcgtcacctgggccgacggcaccgagtacgacctcggcggcgagtgggaccgc
atctccatgtacggctcgctcagcgaggcagcgggcgtcgagatcacgcccgccaccacc
gtcgacgagctgcaggccatcgccgaccgcgagggcgtcgtcgtgccgctgagcacgcac
ggcaagctcgtcgaggagctctgggagcacttcgtcaagggcggcctcgagcgccccaca
ttcgtgctcgacttccccgtcgagacctccccgctcacgcgcgcgcaccgctccatcgag
ggcgtcgtcgagaagtgggacctctacatccgcggcttcgagctggccaccggctactcc
gagctcgtggatcccgtcgtgcagcgcgagcgcttcgtcgaccaggcgcgccagtcggcg
cgcggcgacgacgaggccatgcctctcgatgaggagttcctccgtgccctcgagcacggg
atgccgccctcgggtggcatgggcatgggggtcgaccggctcctcatggccatcaccggt
ctcggcatccgcgagaccatcctgttccccctagtgaagtag
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