Clavibacter seminis: KYT88_04645
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Entry
KYT88_04645 CDS
T11076
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
csei Clavibacter seminis
Pathway
csei03030
DNA replication
csei03430
Mismatch repair
csei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KYT88_04645
03430 Mismatch repair
KYT88_04645
03440 Homologous recombination
KYT88_04645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csei03032
]
KYT88_04645
03400 DNA repair and recombination proteins [BR:
csei03400
]
KYT88_04645
Enzymes [BR:
csei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KYT88_04645
DNA replication proteins [BR:
csei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KYT88_04645
DNA repair and recombination proteins [BR:
csei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KYT88_04645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
RuvB_N
DnaX_C
Rad17
AAA_14
AAA_30
AAA_16
nSTAND3
AAA_19
AAA_28
TFA2_Winged_2
AAA_18
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
UKF25992
LinkDB
All DBs
Position
971394..973883
Genome browser
AA seq
829 aa
AA seq
DB search
MVTALYRRYRPENFAELIGQTQVTDPLRTALRTNRVNHAYLFSGPRGCGKTTSARILARC
LNCAEGPTDTPCGVCPSCVELSRDGSGSLDVVEIDAASHNGVDDARDIRERAVFAPARDR
YKIFILDEAHMVTPQGFNALLKIVEEPPEHVKFIFATTEPDKVIGTIRSRTHHYPFRLVP
PAQMLDYVEHLSREESVQVAPGVLPLVVRAGGGSVRDTLSLLDQLIAGSEDESVEYERAV
ALLGYTHAALLDEVIDAVARHDAAAAFAGVDRVIQTGQDPRRFVEDLLERLRDLIIVGAT
SAEGAAAVLRGTPEDELERMRAQAVAFGAVELSRAADVVNAALTEMTGATSPRLHLELLV
ARVLVPASDDTHRGALARVERLERRVGVADAGADPAPAAVAPVTTPAPAPAAAPAPAPVA
TPDPVATPAPVAAPDPTPDAEPTETGTSAPTAYAPVESSPSSSGTGAPVAEAPSAPAPAA
PAAPAAPAAPVGPVTFEQLRDSWPSVVEAVEKAKRSAWLVAVTATPRALAGDVLTLSFVS
ANDAERFKERGAPGQGVSDILRTAILDVLGIRVKFIARVEPHGGTAASTGAPAPTGGGSA
SPAPDASRPTASPATSTGTRSTGGSAPAGSAPTSPTASPAAKAPPAKTTPAGGGWATVAI
PTSDPGATETPAVRAPASRPERSAPAAPAAPAAPAVPPTAPAAAPRAAAPGAPTRGSSVV
PDAHVPDFEEPEPDEFGPAEPGWATGGASPDSAPPVARSVPAQQQQPAPAASGSAPRPDT
PAAAPAASPASAPQRYGESVVRELLQATFIEEKPVERKARPTIRPTGQD
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaccgccctgtatcgccgttatcggccagagaacttcgccgagctcatcggccag
acgcaggtgacggatccgctgcgcaccgccctccgcaccaaccgcgtcaaccacgcgtac
ctgttcagcggcccgcgcggctgcggcaagaccacgtcggcccgcatcctcgcgcgctgc
ctcaactgcgccgagggccccaccgacaccccgtgcggcgtctgccccagctgcgtcgag
ctcagtcgcgacggcagcggatccctcgacgtggtcgagatcgacgccgcgagccacaac
ggcgtcgacgacgcgcgcgacatccgcgagcgcgcggtcttcgccccggcgcgcgaccgc
tacaagatcttcatcctcgacgaggcgcacatggtcacgccgcagggcttcaacgcgctg
ctgaagatcgtggaggagccgccggagcacgtgaagttcatcttcgccaccaccgagccc
gacaaggtcatcggcaccatccgctcccgcacgcaccactacccgttccggctcgtgccg
cccgcgcagatgctcgactacgtggagcacctgtcccgcgaggagagcgtgcaggtggcg
cccggcgtcctgccgctcgtcgtgcgggccggcggcggatcggtgcgcgacaccctctcc
ctgctcgaccagctcatcgccggatccgaggatgagagcgtcgagtacgagcgcgcggtc
gccctcctcgggtacacgcacgcggcgctgctcgacgaggtcatcgacgcggtcgcccgg
cacgacgcggccgccgcgttcgcgggggtggaccgggtcatccagaccggccaggatccg
cgccgcttcgtggaggacctgctcgagcggctgcgcgacctcatcatcgtgggcgccaca
tcggccgagggcgccgccgccgtgctgcgcggcaccccggaggacgagctcgagcgcatg
cgcgcgcaggccgtcgccttcggcgccgtcgagctgtcgcgcgccgcggatgtggtcaac
gccgccctcaccgagatgaccggcgcgacctcgccgcgcctccacctcgagctgctggtc
gcgcgggtgctcgtgcccgcgagcgacgacacgcaccgcggggccctcgcgcgggtcgag
cgcctcgagcgccgggtcggcgtggccgatgcgggagcggatccggcgcccgccgcggtc
gcgcccgtcacgacacccgctcccgcacccgcagcggctccggctcccgctcccgtggcc
acgccggatcccgtggccacgccggcaccggtcgcggctccggacccgacacccgacgcc
gagcccacggagaccggaacgtcggctccgacagcatacgctcccgtcgagtcctccccg
tcgtcgtccggcacgggcgctccggtcgcggaggcaccgtcggcccccgcgcccgccgcg
cccgccgcgcccgccgcgcccgccgcgcccgtcggccccgtcaccttcgagcagctgcgc
gactcctggccgtccgtcgtcgaggcggtcgagaaggccaagcgcagcgcctggctcgtc
gccgtaacggccacgccgcgcgccctcgcgggcgacgtgctcacgctgtcgttcgtcagc
gcgaacgacgcggagaggttcaaggagcgcggcgctccgggacagggcgtcagcgacatc
ctgcgcaccgccatcctcgacgtgctcggcatccgcgtgaagttcatcgcccgcgtggag
ccgcacgggggcaccgccgcttcgactggcgcgcccgctcccaccggcggcggatccgca
tcgcccgcacccgacgcctcccgcccgacggcgtcccccgcgacgtcgaccggcacgcgt
tccacgggcgggagcgccccggcggggtccgccccgacgagcccgacggcgtcacccgcg
gcgaaggcaccgcccgcgaagaccaccccggccggcggcggctgggccacggtggccatc
cccacatccgaccccggcgcgaccgagacccccgccgtccgggcgcccgcctcccgccct
gagcggtccgcgcccgcggctcccgctgcccccgccgctcccgcggtcccgccgacggca
ccggccgccgcaccacgcgccgcggccccgggagcgcccacccgcggatcgtcggtcgtg
cccgacgcgcacgtccccgacttcgaggagcccgagcccgacgagttcggccccgccgag
cccggctgggccaccggcggtgcctctccggactcggccccgcccgtggcccgatccgtc
cccgcgcagcagcagcagcccgcccccgccgcgtccggatccgctccacggccggacacg
cccgccgccgccccggccgcgtctccggccagcgcgccccagcgctacggcgagtccgtg
gtccgcgagctcctccaggcgaccttcatcgaggagaagcccgtcgagcgcaaggcccgc
cccaccatccgccccacaggtcaggactag
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