Clavibacter seminis: KYT88_05815
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Entry
KYT88_05815 CDS
T11076
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
csei Clavibacter seminis
Pathway
csei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KYT88_05815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csei03400
]
KYT88_05815
Enzymes [BR:
csei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KYT88_05815
DNA repair and recombination proteins [BR:
csei03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KYT88_05815
Prokaryotic type
KYT88_05815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UKF26215
LinkDB
All DBs
Position
1223464..1224150
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AA seq
228 aa
AA seq
DB search
MALTLPELVERGLMDAGWAEVLAPVADDIARMGEWLRAEVAAGRPYLPAGDRVLRAFQQP
LSDVRVLIVGQDPYPTPGHPVGLSFSVEPDVRPVPRSLVNIHRELRDDLGIPTPEHGDLT
AWTRSGVLLLNRVLTVRPGAPASHRGKGWEAVTECAIRGLAARGGPLVAILWGKDAGSLA
PLLAPVPSITSVHPSPLSASRGFFGSKPFSRADALLAEQGADPVDWRL
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctgaccctgcccgagctcgtcgagcgcggcctcatggacgccggctgggccgag
gtgctcgcgcccgtcgccgacgacatcgcgcgcatgggcgagtggctgcgcgccgaggtc
gccgccggccgcccctacctccccgcgggcgaccgcgtgctgcgcgcgttccagcagccg
ctctccgacgtgcgcgtgctcatcgtcgggcaggatccgtaccccacgcccggccacccc
gtcggcctctccttctcggtcgagcccgacgtgcggcccgtgccgcggagcctcgtcaac
atccaccgcgagctgcgcgacgacctggggatcccgacgcccgagcacggcgacctcacc
gcgtggacccgcagcggcgtgctcctgctcaaccgcgtgctcacggtgcggccgggcgcg
cccgcgtcgcaccgtggcaagggctgggaggccgtgacggagtgcgcgatccgcggcctg
gcggcgcgcggcggcccgctcgtcgcgatcctctggggcaaggacgcgggatccctcgcg
cccctgctcgcgcccgtgccgtcgatcacctcggtgcacccgagcccgctgtcggcgtcg
cgcgggttcttcggctcgaagccgttcagccgggcggacgcgctgctcgccgagcagggc
gccgatcccgtcgactggcggctctga
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