Clavibacter seminis: KYT88_07050
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Entry
KYT88_07050 CDS
T11076
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
csei Clavibacter seminis
Pathway
csei03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KYT88_07050 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csei03400
]
KYT88_07050 (mutM)
Enzymes [BR:
csei01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
KYT88_07050 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KYT88_07050 (mutM)
DNA repair and recombination proteins [BR:
csei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KYT88_07050 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
DUF7573
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
UKF26449
LinkDB
All DBs
Position
1480178..1481110
Genome browser
AA seq
310 aa
AA seq
DB search
MPELPEVEVVRAGLEPAVAGARVTGVEILDARSLKRHDPLEGAFVDLLVGRVITSAVRRG
KFMWLPLEPDAGRDTTGPRALVTHLGMSGQVLLREPGSDPDGLLRIRMGIEHPVHGELVV
AFVDQRIFGSMAVDRLVPTPDGHAGGRGSPSALVPTQVAHIARDPLDPAFDDELLLDRLA
RRRTGIKRALLDQTLVSGIGNIYADEALWAARIHYAHPTDALGRGRALRLLAEVRQVLAR
ALAEGGTSFDAQYVNVNGASGYFSHSLNAYGQQGKPCPRCGTPIVREAFMNRGSHLCPHC
QVLPDPDAAA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctccccgaggtcgaggtcgtccgcgccggcctggagccggcggtcgccggc
gcgcgcgtcacgggcgtcgagatcctcgacgcgcgctccctcaagcggcacgatccgctc
gagggcgcgttcgtcgacctgctcgtcggccgcgtgatcacctcggccgtccgccgcggc
aagttcatgtggctgccgctcgagcccgacgccggacgcgacacgaccggcccccgcgcc
ctcgtcacgcacctcggcatgagcgggcaggtgctcctccgcgagcccggctccgacccg
gacggcctgctgcggatccgcatgggcatcgagcacccggtgcacggcgagctggtggtc
gcgttcgtcgaccagcggatcttcgggtcgatggccgtcgaccgcctcgtgccgacaccc
gatgggcatgccggtggccgcggatccccgtcggcgctcgtgccgacgcaggtggcgcac
atcgcgcgcgacccgctcgacccggccttcgacgacgagctgctgctcgaccggctcgcg
cggcggcgcacggggatcaagcgcgctctcctcgaccagaccctcgtgagcggcatcggc
aacatctacgcggatgaggcgctgtgggccgcgcgcatccactacgcgcaccccaccgac
gccctcggacgcgggcgcgcgctgcggctcctcgccgaggtgcgccaggtgctcgcgcgg
gcgctggccgagggcggcacgagcttcgacgcgcagtacgtcaacgtcaacggcgcgtcc
ggctacttctcgcactcgctcaacgcctacggtcagcaggggaagccgtgcccgcgctgc
ggcacgccgatcgtgcgcgaggccttcatgaaccgcggctcgcacctgtgcccgcactgc
caggtgctgcccgatcctgacgcggcggcgtga
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