Clavibacter seminis: KYT88_07360
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Entry
KYT88_07360 CDS
T11076
Name
(GenBank) M20/M25/M40 family metallo-hydrolase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
csei Clavibacter seminis
Pathway
csei00220
Arginine biosynthesis
csei00300
Lysine biosynthesis
csei01100
Metabolic pathways
csei01120
Microbial metabolism in diverse environments
csei01210
2-Oxocarboxylic acid metabolism
csei01230
Biosynthesis of amino acids
Module
csei_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KYT88_07360
00220 Arginine biosynthesis
KYT88_07360
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csei01002
]
KYT88_07360
Enzymes [BR:
csei01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
KYT88_07360
Peptidases and inhibitors [BR:
csei01002
]
Metallo peptidases
Family M20
KYT88_07360
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UKF26505
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Position
1554575..1555786
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AA seq
403 aa
AA seq
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MTGPDSGVAAIVDPVDLAAELIRIDSTNPDLVPGAAGETAIAAHVEAWLRARGFDVRVLE
GTPGRPTVLATARGTGGGRTILLDGHLDTVPPGDPERGGLLPRIDGGRLLGRGAFDMKAG
LAAMMVAADRARWIGTRGDVVLALVADEEFASVGTEEALRALAAEGTRIDGAVISEPSQS
EAIVAHRGFGWYEIRLRGRAAHGSMPEQGVDAIAHAGLVLRELDALAERLAAGPRHPLLG
TGAVRVSRIHGGSDAATVADSCVLTIERRFLPGQSTADVEAELRAALDAVAARTPGMDVE
LEVLVARAAFEADVDGPLARAVLDSGARITGSPVPHRGEPFWTDAGLVHEAGIPCILLGV
TGGGAHADEEWAEVDSIRRLADVLEGAILDFCGSGSGSGSAGA
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
gtgacgggacccgacagcggcgtcgcggcgatcgtggatcccgtcgacctcgccgccgag
ctgatccgcatcgactcgaccaaccccgacctcgtgccgggcgcagcgggcgagaccgcc
atcgccgcgcacgtcgaggcgtggctccgcgcccgcgggttcgacgtccgcgtcctcgag
gggacgcccggtcgtccgaccgtcctcgcgaccgcgcgcggcacgggcggcgggcgcacg
atcctcctcgacgggcacctcgacaccgtgccgcccggcgatcccgagcgcggcggcctg
ctcccgcggatcgatggcggacgcctcctcggtcgcggggccttcgacatgaaggcgggc
ctcgccgcgatgatggtcgccgcggaccgcgcccggtggatcggcacgcgcggggacgtc
gtgctcgcgctcgtcgccgacgaggagttcgcgagcgtggggaccgaggaggcgctccgt
gctctcgccgccgagggcacgcgcatcgacggggccgtgatctccgagcccagccagtcg
gaggcgatcgtcgcccaccgcggcttcggctggtacgagatccgcctccgcgggcgcgcg
gcgcacgggtccatgccggagcagggcgtcgacgcgatcgcgcacgcggggctggtgctc
cgcgagctcgacgcgctggccgagcgcctcgccgcggggccccgccacccgctcctcggg
acgggcgcggtgcgcgtctcccggatccacggcggttcggacgcggccacggtcgccgac
tcctgcgtcctcacgatcgagcgccgcttcctccccggccagtcgacggccgacgtcgag
gccgagctgcgcgcggcgctcgacgcggtcgccgcccgcacacccgggatggacgtcgag
ctcgaggtgctcgtcgcccgcgcggcgttcgaggccgacgtcgacgggccgctcgcacgc
gccgtgctcgacagcggggcgcgcatcaccggatcgcccgtcccgcaccgcggagagccg
ttctggaccgacgccggcctcgtgcacgaggcggggatcccgtgcatcctcctgggcgtc
acgggcggcggcgcgcacgccgacgaggagtgggccgaggtcgactcgatccgccggctc
gccgacgtgctcgagggcgcgatcctcgacttctgcgggagcgggagcgggagcgggagc
gcgggcgcctga
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