Clavibacter seminis: KYT88_07650
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Entry
KYT88_07650 CDS
T11076
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
csei Clavibacter seminis
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csei03000
]
KYT88_07650
Transcription factors [BR:
csei03000
]
Prokaryotic type
Helix-turn-helix
XRE family
KYT88_07650
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
Peptidase_M78
HTH_26
HVO_2718
HTH_25
Motif
Other DBs
NCBI-ProteinID:
UKF26558
UniProt:
A0ABY3TH11
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Position
1612713..1614140
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AA seq
475 aa
AA seq
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MDQLVIGRRIRHARKGAGLTLQALGERAGILPSQLSMIENGRRETRLSTLGRIAGALGVD
VTHLLAADAPDARSALEIELDRAQRSSLYGGLGLPAVPASRALPQETLEALVGLHRELAR
RERESIATPEEARRANTEQRLMMRQQDNHIPAIEELAERMLADVGHRSGALSHRSVGRMA
EGLGFELIYVDDLPRSTRSVTDLGEGRIYLPPASIPGGHGLRSMALQAMAHRVLGHEEPA
SYADFLRQRLEINYFAAACLMPLTQSVEFLSEAKSRRDLAVEDFRDAFGVTHEAAALRLT
NISTTHLGLRVHFLRVGGDGAVYKAYENDGLPLPVDVTGAVEGQPVCREWAARGAFDRTN
RTTEFHQYTDTPAGTFWCSTQTGSTAEGEYSISFGVPFAHAKWFRGRETTARSVSRCPDE
SCCRRADPEDAGRWRDRAWPSARLHAHILAPLPRGSFPGVDDRELYAFLDRHAGA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggaccagctcgtcatcggccggcgcatccggcacgcgcggaagggcgccgggctcacg
ctgcaggcgctgggggagcgggcggggatcctgccgagccagctgagcatgatcgagaac
ggccggcgcgagacgcggctgtcgaccctcggccggatcgcgggcgcgctcggcgtggac
gtcacgcacctgctcgcggccgacgcgccggatgcccgctcggccctcgagatcgagctc
gaccgggcgcagcgatcgtcgctctacggcggcctcggcctccccgcggtgccggcgagc
cgggcgctcccgcaggagacgctggaggcgctcgtcggcctgcaccgcgagctcgcacgt
cgcgaacgcgagtcgatcgcgacgcccgaggaggccaggcgggcgaacaccgagcagcgg
ctcatgatgcggcagcaggacaaccacatccccgcgatcgaggagctcgccgagcggatg
ctcgcggacgtcggccaccgcagcggcgccctctcccaccgcagcgtcggccgcatggcg
gaggggctcggcttcgagctcatctacgtcgacgacctgccgcggtccacccgctccgtc
accgacctcggggaggggcggatctacctgccgcccgcgtccatccccggcggccacggc
ctccgctcgatggcgctgcaggcgatggcgcaccgcgtgctcggccacgaggagcccgcg
agctacgcggacttcctccggcagcggctggagatcaactacttcgcggccgcgtgcctc
atgccgctcacgcagtcggtcgagttcctcagcgaggcgaagtcccggcgcgacctcgcg
gtggaggacttccgcgacgcgttcggcgtgacgcacgaggcggcggcgctccggctcacg
aacatcagcaccacgcacctcggcctccgcgtgcacttcctgcgggtgggcggcgacggc
gcggtctacaaggcgtacgagaacgacggcctgccgctgcccgtcgacgtcacgggcgcg
gtcgagggccagcccgtgtgccgggagtgggcggcgcgcggcgcgttcgaccggaccaac
cgcacgaccgagttccaccagtacacggacacgcccgcgggcacgttctggtgctcgacg
cagacggggtccacggccgagggggagtactccatctccttcggcgtgccgttcgcgcac
gcgaagtggttccgcggacgcgagacgacggcgaggagcgtctcgcgctgcccggacgag
tcgtgctgccgccgcgcggatcccgaggacgcgggccggtggcgcgaccgcgcgtggccg
agcgcgcggctgcacgcgcacatcctcgcgcccctgccgcgcgggtcgttccccggggtg
gacgacagggagctgtacgcgttcctcgaccggcacgcgggggcctga
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