Clavibacter seminis: KYT88_08035
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Entry
KYT88_08035 CDS
T11076
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
csei Clavibacter seminis
Pathway
csei03030
DNA replication
csei03430
Mismatch repair
csei03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KYT88_08035 (holA)
03430 Mismatch repair
KYT88_08035 (holA)
03440 Homologous recombination
KYT88_08035 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csei03032
]
KYT88_08035 (holA)
03400 DNA repair and recombination proteins [BR:
csei03400
]
KYT88_08035 (holA)
Enzymes [BR:
csei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KYT88_08035 (holA)
DNA replication proteins [BR:
csei03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KYT88_08035 (holA)
DNA repair and recombination proteins [BR:
csei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KYT88_08035 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
BREX_PglY_6th
Motif
Other DBs
NCBI-ProteinID:
UKF23690
UniProt:
A0ABY3T6L2
LinkDB
All DBs
Position
1697515..1698543
Genome browser
AA seq
342 aa
AA seq
DB search
MATRTSRSTAAKPSAAIPQLSWDAVRPAPVVLVSGTEALLADRAMRRLRDILTAEDPRIE
VSDIEADSYAPGELITLASPSLFAEPRLIRVVNVEKCSDQFLLDAVAYLDQPAHDTYVVL
RHAGGVRGKKLLDAVRSGTGGGIEVVCAELKKDSEKHDFAVAEFRAAKRSITPGAVRQLV
AAFQDDVSELASACQQLISDTAHEITEVTVNQYYGGRVEINAFAVADSAIAGRGGEALVL
LRHALTSGADPVPLIAAFAMKIRTMAKVSGVSGASGQLASKLGMAPWQVDRARRDLQLWD
DAGLGRAIEALAEADAQVKGGGRDPVYSLERMVRTVASRGRD
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaggacgtcccgcagcacggcggcgaagccctccgcggccatcccgcagctc
tcctgggacgcggtgcggccggcgcccgtcgtcctcgtgtccggcaccgaggccctcctc
gccgaccgggcgatgcgacgcctccgcgacatcctcacggcggaggatccgcgcatcgag
gtctccgacatcgaggccgactcctacgcgcccggcgagctgatcacgctcgcgagcccg
tccctgttcgcggagccgcggctcatccgggtcgtcaacgtggagaagtgctcggaccag
ttcctgctcgacgcggtcgcctacctcgaccagccggcccacgacacgtacgtcgtgctc
cggcacgccgggggagtgcgcggcaagaagctgctcgacgccgtgcgctcgggcaccggc
ggcggcatcgaggtcgtctgcgcggagctcaagaaggacagcgagaagcacgacttcgcc
gtggccgagttccgggccgcgaagcgctcgatcacgccgggcgccgtgcggcagctcgtg
gccgcgttccaggacgacgtgagcgagctggcgtcggcgtgccagcagctcatctcggac
accgcgcacgagatcaccgaggtcactgtgaaccagtactacggcggccgggtcgagatc
aacgcgttcgcggtcgcggactcggccatcgccggccgcggcggcgaggctctcgtcctg
ctccgccacgcgctcacctcgggcgcggaccccgtgccgctcatcgccgccttcgcgatg
aagatccgcacgatggccaaggtgtccggagtctcgggcgcgtcgggccagctggcgtcg
aagctcggcatggcgccgtggcaggtcgaccgcgcccgccgcgacctgcagctctgggac
gacgcgggtctcggccgggccatcgaggccctcgccgaggcggacgcgcaggtcaagggc
ggcggacgcgatcccgtctactcgctggagcgcatggtgcgcaccgtcgcctcacgcggt
cgcgactga
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