Clavibacter seminis: KYT88_08295
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Entry
KYT88_08295 CDS
T11076
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
csei Clavibacter seminis
Pathway
csei00051
Fructose and mannose metabolism
csei00541
Biosynthesis of various nucleotide sugars
csei01100
Metabolic pathways
csei01250
Biosynthesis of nucleotide sugars
Module
csei_M01016
GDP-L-Fuc biosynthesis, GDP-Man => GDP-L-Fuc
Brite
KEGG Orthology (KO) [BR:
csei00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
KYT88_08295 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KYT88_08295 (gmd)
Enzymes [BR:
csei01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
KYT88_08295 (gmd)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NmrA
Motif
Other DBs
NCBI-ProteinID:
UKF23736
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Position
complement(1753019..1754071)
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AA seq
350 aa
AA seq
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MAKKAFITGITGQDGSYLAELLLAKGYEVHGLIRRSSTFNTSRIDHLYQDPHEDGAKLFL
HYGDLSDGSRLTTLMMQIQPDEVYNLAAQSHVRVSFDEPEHTADTTGTGTIRLLEAVRLS
GIETRFYQASSSELYGATPPPQSETTPFYPRSPYGAAKLYSFWITKNYREAYDMFAVNGI
LFNHESPRRGETFVTRKITRAVAAIKAGKQDHVYLGNLDSIRDWGYAAEYVEGMWRMLQA
DEPDDFVLATGGNFTVRDFLETAFSHAGLDWSEHVRFDPRYLRPTEVDALVGDATKAEEK
LGWKATVDTTMLARIMVDADIAALEAEGRPWIDSVKLASWGTAEPAAVEA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaaggctttcatcaccggcatcaccgggcaggacggctcgtacctggcggag
ctgctgctcgccaagggctacgaggtccacggcctcatccgccgctcgtcgacgttcaac
acgtcccgcatcgaccacctgtaccaggacccgcacgaggacggcgcgaagctcttcctc
cactacggcgacctgagcgacggctcgcgcctcacgacgctgatgatgcagatccagccc
gacgaggtctacaacctcgcggcccagtcgcacgtgcgcgtctcgttcgacgagccggag
cacaccgccgacacgacggggaccggcaccatccgcctgctcgaggccgtgcgcctctcg
ggcatcgagacccgcttctaccaggcctcctcgagcgagctgtacggggccactcccccg
ccgcagagcgagaccacgccgttctacccgcgctccccgtacggggccgcgaagctctac
agcttctggatcacgaagaactaccgcgaggcgtacgacatgttcgccgtcaacgggatc
ctgttcaaccacgagtcgccccgccgcggcgagacgttcgtgacccgcaagatcacgcgc
gcggtcgccgccatcaaggccggcaagcaggaccacgtgtacctcggcaacctcgacagc
atccgcgactggggctacgccgccgagtacgtcgagggcatgtggcggatgctgcaggcc
gacgagcccgacgacttcgtgctcgccaccggcggcaacttcaccgtgcgcgacttcctc
gagaccgcgttctcgcacgcggggctcgactggtccgagcacgtccggttcgacccgcgc
tacctccgccccaccgaggtcgacgccctggtgggcgacgccaccaaggccgaggagaag
ctcggctggaaggccacggtcgacaccacgatgctcgcccggatcatggtggacgccgac
atcgccgcgctcgaggccgaggggcgcccgtggatcgactccgtgaagctcgcgagctgg
ggcacggccgagccggccgcggtcgaggcgtga
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